Iodobacter ciconiae: EJO50_11085
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Entry
EJO50_11085 CDS
T05767
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
iod
Iodobacter ciconiae
Pathway
iod03420
Nucleotide excision repair
iod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJO50_11085
03430 Mismatch repair
EJO50_11085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iod03400
]
EJO50_11085
Enzymes [BR:
iod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJO50_11085
DNA repair and recombination proteins [BR:
iod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJO50_11085
MMR (mismatch excision repair)
Other MMR factors
EJO50_11085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
PcrA_UvrD_tudor
PcRGLX_2nd
Motif
Other DBs
NCBI-ProteinID:
AZN36981
UniProt:
A0A3S8ZU63
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All DBs
Position
2569424..2571544
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AA seq
706 aa
AA seq
DB search
MSHPLTAKLNPEQAAAVELPPEHALILAGAGSGKTSVLTTRIAWLLSTGQCSPAGLLSVT
FTNKAAKEMLLRITSMMPLNPRGLWIGTFHGLCNRMLRLHWRDAGLPETFAILDSAEQLS
LIKRILKALNIDDEKYPAKVVQQYINGHKENGRRASDVDAWDDYSRMLRLIYEEYEKQCQ
REGVADFSELLLRCYELLSKNESLRTHYQSRFRHILVDEFQDTNKLQYAWLKLLAGQHNA
LFAVGDDDQSIYAFRGANVGNMHDFQSDFSVKHVIRLEQNYRSQGNILDAANAVISHNKN
RLGKELWTSEPAGEPIRVFEAATDFEEAAFIVEEAQTLMREGAAARDIAILYRANAQSRV
IEHALFTAGVPYRVYGGLRFFERQEIKHALAYLRLIANPGDDNALLRVINFPTRGIGART
IESIQETAQHAGTTLWQAACSGAAGRGAAAVRKFAEIIESMRSQATGLAMPELVDMMLDL
SGLRAHYQADKEGEERLANLGELINAATSFVQEDENNLIAFLSHASLEAGDHQAGAHEEA
LQLMTVHASKGLEFHAVFLCGLEEGLFPHDNSMNDASAVEEERRLMYVAITRARRRLYIT
LAQSRMLHGQTRYAVASRFMQEIPQQLLKFLNRGYAPQGYSGPAAVAGKAPTPEHGLAIG
MNVEHPKFGKGVITDHEGGASGNVQVNFATAGSKWLAVAYAKLKVL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatcctctcaccgcaaaactaaaccctgaacaggccgcagccgttgaattaccc
ccggaacatgcgcttattcttgcgggcgctggcagtggaaaaaccagtgtgctcactacc
cgtattgcctggcttttatcaacagggcaatgcagcccggccggtttattatctgttact
tttaccaataaagccgccaaggaaatgctcttacgtattacttcaatgatgccgcttaat
ccccgtggattatggataggtacatttcatggtttatgtaatcgcatgctgcgtttacat
tggcgcgatgccggcttacccgaaacttttgcaattttagattctgccgagcaactgtct
ctaattaaacgtattttgaaagctttaaatattgatgatgaaaaatatccggcaaaagtt
gttcagcaatatattaatggccataaagaaaatggccgcagagccagtgatgtagacgca
tgggatgattattcgcgcatgctgcgattaatttatgaagaatatgagaagcaatgccaa
cgggaaggcgttgctgatttctctgaattattactgcgctgctacgaattactttctaaa
aatgaatcattacgaacccattatcaaagccgtttccgccatattttagttgatgaattt
caagacacaaataaactgcaatacgcttggttaaagcttttagccggccagcataatgca
ctatttgccgtaggagatgatgatcaatctatttacgcattccgtggtgccaatgtaggg
aatatgcatgattttcaaagcgatttttctgtaaaacatgtaattcgtttagagcaaaac
taccgctcccaaggcaatattctagatgctgccaatgccgttattagtcataacaaaaat
cgtttaggcaaagaattatggacgagcgagcccgctggcgaaccaattcgtgtatttgaa
gctgcaaccgattttgaagaagcggcttttattgtagaagaagcacagaccctgatgaga
gaaggcgcagcagctcgcgacattgccattctttatcgcgccaacgcccaatcacgtgtt
attgagcatgctctgtttaccgcaggtgtgccctaccgggtgtatggtggcttacgcttt
tttgagcgccaggaaatcaaacatgctttggcctatttacggcttatagccaatccggga
gacgataacgccctgctgcgcgtgatcaacttccccacccggggcattggtgcgcgcaca
atagaaagtatccaggaaaccgcccagcatgccggaacaacgctttggcaagcagcctgc
tccggagccgccggacgcggggctgcagcggtcaggaagtttgcagaaataatcgaaagc
atgcgctcacaagccaccggtcttgccatgccagaactagttgacatgatgcttgatctg
tctggcctacgcgcccattatcaggcagacaaagaaggtgaagagcggcttgccaacctg
ggtgagctcattaatgcagccaccagttttgttcaggaagatgaaaacaatctgatcgcc
ttcctgtcccacgccagccttgaagcgggcgatcatcaggcaggcgcgcatgaagaagct
ctgcagctgatgactgtacacgcctccaaagggctggaatttcatgcggtatttttatgt
ggccttgaggagggcttattcccgcacgacaacagcatgaatgatgccagcgcagtagaa
gaagaacgccgcctgatgtatgttgccattacccgggctcgccgccgcctttacattacc
ctggcacaaagtcgtatgctgcacgggcagacacgatacgccgtagccagccgctttatg
caggaaattccacagcagctgctaaaattcctgaatcgcggctacgcgccgcaaggctat
tctggtccggctgccgttgctggcaaagcccctactcccgagcatggacttgccattggc
atgaatgtagagcaccccaagtttggtaagggcgtcattacagatcatgaaggcggggca
agtggcaacgtgcaggtcaattttgcaacggcaggatcgaaatggttggcagtagcctat
gccaaactaaaagtactttga
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