Iodobacter ciconiae: EJO50_14945
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Entry
EJO50_14945 CDS
T05767
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
iod
Iodobacter ciconiae
Pathway
iod02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EJO50_14945 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iod02000
]
EJO50_14945 (msbA)
Enzymes [BR:
iod01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
EJO50_14945 (msbA)
Transporters [BR:
iod02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EJO50_14945 (msbA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
DEAD
AAA
DUF87
AAA_25
RsgA_GTPase
NACHT
AAA_16
AAA_18
ABC_ATPase
DUF3584
AAA_29
nSTAND3
AAA_28
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AZN37648
UniProt:
A0A3S8ZW25
LinkDB
All DBs
Position
complement(3389866..3391608)
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AA seq
580 aa
AA seq
DB search
MSATNNRALYMRILGEIRPYWKIVVISVVCLTVAAAVDAGLTLLLKPLVDQNLQTSALAR
NLAWILPAQILGLALLRLVSNFGNEYTTAWVSSRVMHDLRGKMFARMLSLPVQFFDQTSV
GVLLSRITFDVNQIMDAGTKVLTVLIKDSLLLIFLLASMLYLDWQLTLLCLILLPGVAIS
ISVVGKRQRRLSRETQAAMGNMTQILDESLSGQRIIKIFGGFSYETNRFGNTNNNVRRLS
IKQAITSSINSGLIMFLIGITLAVIIYYASLRAQDGLLTAGAFVAFMVQMMALQQPIKNL
TKINESLHKGLAAAESVFAILDQTPEASRGLYQLPRVQGAISLQDIRFAYGNDGKPALDG
ISLDILPGETIALVGSSGSGKTTLANLLPRFYELNAGQILIDQVPLADYQLANLRQQIAL
VSQDVILFNDTVTANIAYGSEVDMNRVRQAAIAAHALEFIDAMPDRMNTLLGENGMRLSG
GQRQRLAIARAIYKDAPILILDEATSALDTESERKVQDALENLMQGRTTLVIAHRLSTIE
NASRIVVMQQGKIVESGTHQALMASNGMYCRMHVAQFANS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgacgaataatcgagctctttatatgcgcatcttgggcgaaattcgcccctac
tggaaaatcgtcgtcatttctgtggtttgcctgaccgttgctgcagccgtcgatgcaggc
ttaacactcttactcaagccgctggttgatcaaaatttacaaacatcggcactggcccgt
aatctggcctggatattgcccgcacaaattttagggctggcgctgctacggctggtttcc
aactttggcaatgaatacaccacagcgtgggtttcatccagagtgatgcacgatttacgc
ggcaaaatgtttgctcgcatgctaagcctgccggtgcaattttttgatcaaacctcggtt
ggggttttactgtcgcgcattacttttgatgttaatcagatcatggatgcgggcacaaaa
gtgctcacagtgctgatcaaagacagcttactactgatctttttactagcctccatgctg
tatttagattggcagctcaccctcttgtgcctgattttgctacccggtgtcgccatcagt
atcagcgtggtaggcaagcgccagcgcaggctttcacgtgaaacacaggccgccatgggc
aatatgacacagatcctggacgaaagcctttccggccagcgcatcatcaaaatattcggc
ggtttttcttatgaaacgaatcgctttggcaataccaacaataatgtgcgccgcttatcg
atcaagcaggccattacctccagcattaactccggcctgatcatgtttttgattggtatc
acgctggctgtcattatttattacgccagcttgcgtgctcaggatggtttactgacagca
ggtgcatttgttgcctttatggtgcaaatgatggccttgcaacaacctatcaaaaacctc
accaaaattaatgaaagcctgcataaaggcttagctgctgctgaatctgtatttgccatt
ttggatcagactcctgaagccagccggggcttgtaccagcttccccgcgtgcaaggcgca
atatcactgcaagatattcgctttgcctatggaaatgatggaaaacccgctctggatggc
atttcactggatattttgccaggtgaaaccattgccttagtgggcagctccggcagcggc
aaaaccacgctggctaatctgttaccacgcttttatgaactaaatgccgggcaaatttta
atcgatcaggtgccgctggccgattaccagctggctaatttacgtcagcaaattgccctc
gtttcgcaagatgtgattctatttaacgatacggtaacagctaatattgcttacggtagt
gaagttgatatgaatcgtgtacgtcaggccgcgatcgccgcacatgccttagagtttatc
gatgccatgccagacagaatgaataccctgctgggtgaaaacggcatgcgtttatctggc
ggacagcgccagcgcctcgccattgctcgcgccatttataaggatgcaccgattctgatt
ctggacgaagccaccagtgcactggacaccgaatccgagcgcaaagtacaggatgctctg
gaaaacctgatgcaaggccgcaccacgctggtcattgcccaccggctgtctaccatcgaa
aacgccagccgtattgtagtaatgcaacagggcaagattgttgaaagcggcacgcaccag
gcactcatggccagcaatgggatgtattgccgaatgcacgtcgcacaatttgcaaatagc
tga
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