Iodobacter ciconiae: EJO50_15110
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Entry
EJO50_15110 CDS
T05767
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
iod
Iodobacter ciconiae
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iod03021
]
EJO50_15110 (rpoH)
Transcription machinery [BR:
iod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EJO50_15110 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AZN37677
UniProt:
A0A3S8ZW00
LinkDB
All DBs
Position
complement(3428016..3428867)
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AA seq
283 aa
AA seq
DB search
MASAVTLPVLSGGDSIESYIQRVNTVPMLSQEEETSLAQRYHQDNDLEAAKQLVMSHLRV
VVSIARGYSGYGLPQADLIQEGNIGLMKAVKRFEPGRGVRLFSFAVHWIKAEIHEYVLRN
WRLVRVATTKAQRKLFFNLRSMKPGFAALTTTEAQKIADDLGVKREEVLEMETRMSGQDI
SLVADDNDDEGYAPIDWLADHDSAPDATLARRATDKLHTEGLQMALASLDERSRRIVETR
WLADEGSSLTLHDLAAEFDVSAERIRQIEAKALSKMKQTLLPA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcagttacacttcccgtactgtccggtggagacagcatcgagagctatatc
cagcgtgtaaataccgttcccatgctctcgcaggaagaagaaaccagccttgcccagcgc
taccaccaggacaatgacttggaggcagccaagcaactggtgatgtcccatctgcgagta
gtggtgtcgatcgcacgtggctattccggctacggcctgcctcaggcagacttaatccag
gaaggtaatatcggcctgatgaaggcggtaaagcgcttcgaacccggccgtggcgtacgc
ttgttttcctttgcggtgcactggattaaagccgaaatccatgaatacgtgttgcgcaac
tggcgtctggtgcgtgtggcgacgaccaaagcccagcgtaaattattctttaatctgcgt
tccatgaagcccggctttgccgcactcaccactacggaagcacaaaaaatcgcggatgat
ctgggagtaaaacgcgaagaagtactggaaatggaaacacggatgagcggccaggatata
tcgctggttgccgatgacaatgatgacgagggctatgccccgattgactggctggctgat
cacgacagcgcaccggacgccaccctggcccgccgcgccacagacaagctgcataccgaa
ggcctgcaaatggcactcgccagcctagatgagcgcagccgccggattgtagaaacacgc
tggctggccgacgaaggctcatccttaacactgcatgatctggctgcagagtttgacgtc
tctgccgagcgtatccgccagatcgaggccaaagccctcagcaaaatgaagcagacttta
ctgccagcgtaa
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