Iodobacter ciconiae: EJO50_15385
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Entry
EJO50_15385 CDS
T05767
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
iod
Iodobacter ciconiae
Pathway
iod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJO50_15385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iod03019
]
EJO50_15385
Messenger RNA biogenesis [BR:
iod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EJO50_15385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AZN37729
UniProt:
A0A3S8ZW93
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All DBs
Position
3490901..3491416
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AA seq
171 aa
AA seq
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MLDRDGYRPNVGIIIINRQNQVFWGKRVREHSWQFPQGGIKQGETPEQAMYRELMEEVGL
GPQHVEIIGRTRDWLKYDVPTNWVRREWRGTYRGQKQIWFLLRLTGHDSDVCLRRTMHPE
FDAWRWTEYWSPLDSVIEFKRTVYESALFELTRFFEEAPERVVRVMRFSGH
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcgtgatggctatcggcctaacgtcggcatcatcatcatcaaccggcaaaac
caggtgttctggggcaaacgggtgcgtgagcactcgtggcagtttccgcaaggcggcatt
aaacagggtgaaacacccgaacaggcgatgtatcgcgagctgatggaagaagttggatta
ggccctcagcatgttgaaatcattggccgcacaagggattggttgaagtacgatgtgccg
acaaactgggttcgccgcgaatggcgcggtacgtaccgggggcagaagcaaatttggttt
ttgcttcgcctgacggggcacgattctgatgtgtgcttgcgccgcactatgcatcctgaa
ttcgatgcatggcgctggactgaatattggtcaccgcttgattcggtgattgaattcaag
cgtacggtgtatgaatctgctctttttgaactgactcgtttctttgaagaagcacctgag
cgtgtggttcgtgtcatgcgtttttcaggtcactag
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