Iodobacter ciconiae: EJO50_15395
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Entry
EJO50_15395 CDS
T05767
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
iod
Iodobacter ciconiae
Pathway
iod02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EJO50_15395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
iod02022
]
EJO50_15395
02035 Bacterial motility proteins [BR:
iod02035
]
EJO50_15395
Two-component system [BR:
iod02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
EJO50_15395
Bacterial motility proteins [BR:
iod02035
]
Pilus system
Twitching motility proteins
EJO50_15395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_28
Xre-like-HTH
HTH_30
PG_1098_Fer
Motif
Other DBs
NCBI-ProteinID:
AZN37731
UniProt:
A0A3S8ZW75
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All DBs
Position
3493325..3494674
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AA seq
449 aa
AA seq
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MAKKINKNSKRVLVVDDEHDLAELLELTLIKMGLDVDCAYGVQDACARLDRAAYDLCLTD
MRMPDGEGLEIIRHIQAKGMDVPVAVITAYGSTDNAVAALKAGAFDYLAKPVALDQLRLL
VKSALALDDMLVLDVSDRPLLGESAAMQHTLELISKLAKSQAPVYVTGESGSGKERAARL
IHGSSSRAKQPFVAVNCGAIPENLMESEFFGHKKGAFTGANEDRDGFFHAANGGTLFLDE
VADLPLAMQVKLLRVIQERKVRKLGATAEDALDVRIISATHQSLSQCVEAGRFRQDLYYR
LNVIELRMPALREMGSDVLVIARHVLARVAKLNGQKLPDFAADALTALQRYDFPGNVREL
ENVLERALALADGCAITAADLQLSLSDHEDEEGLDLGEKFPLQDYLDRVEKQAILEALEK
TRFNRTQAAKILGLTFRSLRYRLDRLGIQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaaatcaataaaaacagtaagcgtgtactggtggttgacgatgagcatgat
cttgctgagctgctggaacttacgctcataaaaatggggctggatgtagattgtgcttat
ggagtgcaagatgcatgtgcaaggctagatcgtgcggcgtatgacctgtgccttaccgat
atgcggatgcccgatggtgaggggctggaaatcatccggcatattcaagcaaaaggaatg
gatgtgccggtggcagtgattactgcctatggcagtactgacaatgcggtggcggcgcta
aaagcaggcgcatttgattacctggctaaaccggtggctttggatcagctgcgtttattg
gttaaatcggctttagcccttgatgatatgctggtgttggatgtgagcgatcgcccttta
ttgggtgaatctgccgccatgcagcacacattggagctgatttccaaattggctaaaagt
caggctcctgtttatgtaacgggagaatccggctctggcaaagagcgggctgcgcgtttg
atccacggcagctccagccgtgccaagcagccttttgtggcagtaaattgtggggctatt
cctgaaaatttaatggaaagtgaatttttcggacataaaaaaggtgcttttactggcgca
aatgaagacagagatggtttttttcatgccgcaaatggcggtaccttgtttttagatgag
gtggctgatcttccgcttgccatgcaggtcaaactattacgggtgattcaggaacgtaaa
gtgcgcaaactgggggcgacggccgaggatgcgctggatgtgcggattatctctgccacg
caccaaagtctgagccagtgtgtggaagcagggcggttcaggcaggatttatattatcgc
ctgaatgtgattgagctgcgtatgccggctttaagggaaatgggcagtgatgtcttggtg
attgcccggcatgtgctggcgagagtggctaagttaaatggccagaagttacctgacttt
gctgcagatgcactcactgcacttcagcgctacgattttcctggcaatgtgcgcgagctg
gaaaacgtactggagcgtgctctggctctggctgatggatgcgctattacggcggcggat
ttgcaacttagccttagcgatcatgaggatgaagaagggctggatctgggggaaaaattc
cctttgcaggattatttggatcgggttgagaagcaggccattctagaggctctggaaaaa
acacggtttaaccgtactcaggccgctaaaatactcggcctcactttccgaagcctgcgt
tatcgcctagaccggttgggaattcagtaa
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