Iodobacter ciconiae: EJO50_15590
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Entry
EJO50_15590 CDS
T05767
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
iod
Iodobacter ciconiae
Pathway
iod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EJO50_15590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iod03400
]
EJO50_15590
Enzymes [BR:
iod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EJO50_15590
DNA repair and recombination proteins [BR:
iod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EJO50_15590
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJO50_15590
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJO50_15590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AZN37763
UniProt:
A0A3S8ZW82
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All DBs
Position
complement(3546393..3547817)
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AA seq
474 aa
AA seq
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MHTFYWHDYETFGINPRRDRPSQFAGIRTDAELNEIGKPLNIFCKPAPDYLPDPEACLLT
GITPQHCLENGMDEFEFAARIEAELATPETVSLGYNTIRFDDEVTRFMFWRNLIEPYSRE
WQNDCSRWDLLDVVRTTYALRPEGIVWPTHDDGRPSFKLEHLTQANGISHEAAHDALSDV
RATIALARLIRDKQPKLFDFCFSLRKKDKVLEQIGLPNSKPFLHISGMFSAERGCIALVW
PLAMHPSNKNEVIVWDLAFDPSEIFTLDAETIRLRMFSKTADLPDGVTRLPIKSIHINKS
PIVIGNLKTLSSERATHWNIDVEQALAHSQIAESAPDMSAIWQQVFTSEHAQADVDEDLY
GGFIGNNDKRLLAKLRHFSPEELAKERVSFEDRRLEEVFFRYRARNFPLSLSPAELRRWE
QHRAARLFDGASGARTLEAFGDAIDTLSENVNEQQADILSALFDYAESIMPDEE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcataccttttactggcacgattacgaaacctttggcatcaacccgcgccgtgatcgc
ccttcgcagtttgccggcattcgcaccgatgcagagctaaatgaaatcggcaagccactg
aatattttctgtaaacccgcccccgactacctgcccgacccggaagcctgcctgctgacc
ggcattacgccacagcattgcttagaaaatggcatggatgaatttgaatttgccgcccgt
attgaagcggagctggccacgcccgaaaccgtgtctttgggctacaacaccattcgtttt
gacgatgaagtcacacgctttatgttctggcgtaatctgatcgagccttactcgcgtgaa
tggcaaaatgattgcagccgctgggatttactcgatgtggtacgcaccacctacgcgctg
cgccccgaaggcatagtctggcccacacacgacgatggccgcccatccttcaaactggag
cacctcacccaggccaacggcatcagccacgaagcagctcacgatgcgctgtcggatgtc
cgtgccaccattgcgctggcgcggctgatcagagataaacaacctaagctattcgatttt
tgcttttcactacgcaaaaaagacaaagtactggagcaaatcggcctgcctaacagcaag
ccttttctgcatatcagcggcatgttttctgccgagcgcggctgcattgcgctagtctgg
cctctcgccatgcatcccagcaataaaaacgaagtcatcgtatgggatttagcttttgat
ccgagtgagattttcactttggatgccgaaaccatacgcctgcgcatgttcagcaaaacg
gctgatttaccggatggtgtcacccgcctgccgattaaaagcattcatattaataagtcc
ccgattgtgatcggtaatctcaaaaccttaagcagcgagcgggccacccactggaatatc
gatgtagagcaggccttagcccactcccaaatcgccgaaagcgctcccgatatgagtgca
atctggcagcaggtatttaccagcgagcatgcccaagccgatgtggatgaagatttatat
ggcggctttattggcaataacgataaacgcctactggccaaactccgccactttagcccc
gaagagctggcaaaagagcgggtgagttttgaagaccgccgccttgaagaagtgtttttc
cgctaccgcgccagaaacttccctctcagcctgagccctgccgaactacgccgctgggag
cagcatcgtgcggccagattatttgacggtgccagcggagcacgaaccttagaagccttt
ggcgatgcgattgatacgctatcggaaaacgtcaatgagcagcaggctgatattctttct
gctctgtttgattacgccgaaagcattatgccggatgaggagtaa
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