Iodobacter ciconiae: EJO50_16105
Help
Entry
EJO50_16105 CDS
T05767
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
iod
Iodobacter ciconiae
Pathway
iod00521
Streptomycin biosynthesis
iod00523
Polyketide sugar unit biosynthesis
iod00541
Biosynthesis of various nucleotide sugars
iod01100
Metabolic pathways
iod01110
Biosynthesis of secondary metabolites
iod01250
Biosynthesis of nucleotide sugars
Module
iod_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EJO50_16105 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EJO50_16105 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EJO50_16105 (rfbC)
Enzymes [BR:
iod01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EJO50_16105 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZN37853
UniProt:
A0A3S8ZWI1
LinkDB
All DBs
Position
3659626..3660195
Genome browser
AA seq
189 aa
AA seq
DB search
MKIIDTAISDVKIIEPQVFGDDRGFFYESFNHAKFEASIGRKVEFVQDNHSRSVKGVLRG
LHYQLPPHPQGKLVRCTLGEVFDVAVDIRKSSPTFGKWVGATLSAENKHQMWIPEGFAHG
FVVISDVAEFLYKTTDYWFPEFERSILWNDPELNVDWPCSDQVQLSAKDKLAKVLAKAEY
FNNHSVVME
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcattgatacagcaattagcgacgttaaaatcattgaaccgcaagtctttggc
gacgatcgtggtttcttttatgaaagttttaaccacgccaaattcgaagccagcattggc
cggaaagttgaatttgtgcaggataaccattcccgctctgtaaaaggggtattgcgtggt
ttgcattaccaattgcccccgcatccccagggtaaattagtgcgctgcactttgggtgaa
gtctttgatgtagccgtagatatccgcaaatcttccccaacctttggaaaatgggtggga
gctacgctgagcgcagaaaataaacaccagatgtggataccggaaggctttgcccatggc
tttgtagtgatctctgatgtggctgagtttttatataaaacaacagattactggtttccg
gaatttgagcgatcaatattatggaatgatccggaattaaatgttgattggccttgttca
gatcaagtgcaattatctgccaaagataaattagctaaggtattggctaaagcagaatat
tttaataatcatagcgtggtgatggaatga
DBGET
integrated database retrieval system