Iodobacter ciconiae: EJO50_16435
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Entry
EJO50_16435 CDS
T05767
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
iod
Iodobacter ciconiae
Pathway
iod03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJO50_16435 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iod03400
]
EJO50_16435 (uvrB)
DNA repair and recombination proteins [BR:
iod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJO50_16435 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJO50_16435 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
EAD9
Kinesin
DUF7776
UB2H
DALR_1
Motif
Other DBs
NCBI-ProteinID:
AZN37914
UniProt:
A0A3S8ZWX5
LinkDB
All DBs
Position
complement(3735068..3737083)
Genome browser
AA seq
671 aa
AA seq
DB search
MFVDYPGSPYRLFQPFAPAGDQPTAIAQLLEGLDDGLQYQTLLGVTGSGKTYTIANVIAQ
SGRPAILMAPNKTLAAQLYSEMREFFPQNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSAI
NEHIEQMRLSATKAILERPDCIIVATVSAIYGIGDPSSYHQMILHLKEGERVAQRDMIKR
LTAMQYDRNDTDFSRGCFRVRGDVIDIFPAESAELALRVNLFDDELETLQLFDPLTGHIK
QRVGRFTVFPSSHYVTPREKVLEAIETIKAELTDRLAFYYKEHKLVEAQRLEQRTRFDLE
MLIEMGFCKGIENYSRHFSGKPAGSAPPTLINYMPPNSIMIIDESHVTIPQIGAMYKGDR
SRKENLVDYGFRMPSALDNRPLKFEEFEQLMPQTVFVSATPSDYEAKHQGQVVEQVVRPT
GLVDPIIEVRPVGTQVDDLLSEIKLRTEQGERVLVTTLTKRMSEQLTDYLSEHGVKVRYL
HSDIDTVERVEILRDLRLGVFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLI
QTIGRAARNLNGKAILYADRITNSMKKAIDETERRRTKQTAFNLANGITPRSVVKRIKDM
IDGVYNEEEAVAARLEIKRQKMLNEFDEKSLAKELKRLEKEMIEAAKNLEFEKAAQLRDQ
LKMLRDQVFGS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcgattaccccggcagcccctaccgcctgtttcagccatttgcgcctgctggc
gatcagccgacggccattgctcagttgcttgaggggctggatgatggtttgcagtatcag
accctgcttggggtaactggctcgggtaagacttacaccatagccaatgtgattgcccag
tcagggcggccggctattttgatggcgccgaataagacactggcagcgcagctttactcg
gagatgcgtgaattctttccgcaaaatgcggttgaatactttgtgtcttactacgattat
taccagcccgaagcctatgtgcccagccgcgatttatttatcgagaaagactcggccatt
aatgagcatatcgagcagatgcggctttccgccaccaaggcgattttagagcggccggat
tgtattattgtggccaccgtcagcgcgatttacgggattggcgatcccagctcttaccac
cagatgattttgcatctgaaagaaggcgagcgcgttgcccagcgcgatatgatcaaacgc
ctgaccgccatgcaatacgatagaaatgacaccgatttcagccgtggctgttttagggtg
cgtggtgatgtaatcgatatcttccccgccgaatcggccgaattagcgctgcgggtaaac
ttatttgatgatgagctggaaacgctgcaattattcgacccgcttacaggccatatcaag
cagcgcgtgggccgctttacggttttccccagcagccattatgttaccccgcgtgaaaaa
gtactggaagcaatcgaaaccatcaaggcagagctgactgaccggctggcgttttattac
aaagaacacaaactggttgaagcgcagcggctggagcagcgcacccgttttgatttagaa
atgctgattgaaatgggcttttgtaagggcattgaaaactactcacggcatttctccggc
aagccggcaggatcggccccgccaacgctgatcaactatatgccgcccaattcgatcatg
attatcgacgaaagccacgtgaccattccgcaaattggcgcgatgtataaaggcgatcga
tcacgcaaggaaaatctggtcgattatggctttcgtatgccctccgcgctcgataaccgg
ccgctgaagtttgaagaattcgagcaactaatgccgcaaacggtgtttgtctccgccacg
ccatcggactacgaagccaagcatcagggccaggtggtggagcaggtggtacgcccgacg
ggcctggttgatccgattatcgaagtgcgccctgtgggcacgcaggtggatgatttactt
tcggaaatcaagctgcgcaccgaacagggcgagcgggtgctggtgaccacgctgaccaaa
cgcatgagcgagcagctgacagattacctgagcgagcacggggtaaaagtgcgctattta
cactcggatatcgataccgtagagcgcgtcgaaattctgcgcgatttgcgccttggcgta
tttgatgtgctgatcgggattaacttactgcgcgaagggctggatatccctgaggtatcg
ctcgtggcgattttagacgcagataaagaaggctttttaagatcagagcgcagcttaatt
caaaccattggccgcgccgcgcgtaatttaaatggtaaagccattctttacgccgaccgg
attaccaattcgatgaaaaaagccatcgatgaaacagagcgccgccgcaccaaacaaacc
gcctttaatctggccaatggcattaccccgcgcagcgtcgttaaacgaattaaagatatg
attgatggcgtatataacgaggaagaagccgtagccgcccgattagaaataaaacggcaa
aaaatgctgaatgaatttgacgaaaaatccctcgccaaagaattaaaacgcctcgaaaaa
gaaatgatcgaagccgctaaaaatctggagtttgaaaaagcggcccaattgcgtgatcaa
ttaaaaatgctgagagatcaggtatttggcagctaa
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