Iodobacter ciconiae: EJO50_16505
Help
Entry
EJO50_16505 CDS
T05767
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
iod
Iodobacter ciconiae
Pathway
iod02020
Two-component system
iod02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EJO50_16505
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EJO50_16505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iod03021
]
EJO50_16505
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
iod02035
]
EJO50_16505
Transcription machinery [BR:
iod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EJO50_16505
Bacterial motility proteins [BR:
iod02035
]
Flagellar system
Flagellar assembly proteins
Stator
EJO50_16505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AZN37927
UniProt:
A0A3S8ZWN6
LinkDB
All DBs
Position
complement(3751386..3752126)
Genome browser
AA seq
246 aa
AA seq
DB search
MTAPRALSLYRQTQAGSEDDYVTHHASLVKRIAYHMVSRLPASVEVDDLIQVGMMGLMEA
AKNFDANAGVLFETFASQRIRGAMLDELRSADWMPRQARKHMRDIETALLKLGHSLGRAP
LESEVAHHLQVSLEQYQDMLTEARGHQLVHLDDFEEDEENHHSEHNVADQSHNPLNQLSE
THFKQKLIEAIDALPEREKLVMALYYDEELNLKEIGAVLSVTESRVCQLHSQAIARLRAR
LGDWTG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgccacgcgcactttctctttatcgtcagacccaggccggcagcgaagatgat
tacgtcactcaccatgcctcgctggtcaagcggatcgcctatcacatggtgagccgtctg
cctgccagcgtggaagtggacgacctgatacaggtaggcatgatggggctaatggaagct
gcaaaaaactttgatgccaatgcaggtgtgctgtttgagacttttgcctcacagcgtatt
cgcggcgcaatgctggacgaattaagaagcgccgactggatgccccgccaggccagaaaa
catatgcgggatattgaaaccgcactgttaaaacttggccacagcctgggcagagccccc
ctggaaagtgaagttgcccatcaccttcaggtcagccttgagcaataccaggacatgctc
accgaggcgcgcggccatcagctggtgcatttggacgatttcgaagaagatgaagaaaat
catcatagtgaacataatgtggcagatcagtcacacaatccgctcaatcagctctctgaa
acacacttcaaacaaaaattaatagaagctattgatgcgctgcccgaaagggaaaagctc
gtgatggcactttactacgacgaagaactcaatcttaaagaaattggggccgtactcagt
gtcaccgaatcccgggtttgccagctgcacagccaggccatcgcccggctgcgggcgcgc
ctgggtgattggacaggttga
DBGET
integrated database retrieval system
