Isosphaera pallida: Isop_0037
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Entry
Isop_0037 CDS
T01407
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ipa
Isosphaera pallida
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipa03016
]
Isop_0037
Enzymes [BR:
ipa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Isop_0037
Transfer RNA biogenesis [BR:
ipa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Isop_0037
Prokaryotic type
Isop_0037
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
ADV60634
UniProt:
E8R4P3
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All DBs
Position
complement(43782..44765)
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AA seq
327 aa
AA seq
DB search
MKPFSSSLHGFLNLAKPPGWTSREVVDFVVRLFPRRSAPKVGHAGTLDPLATGVLVVAVG
EATKLIDRVQAQTKVYTATIRLGADSDTLDAAGVVVERDPAGLVPPSVEQIENALQEQVG
TIQQVPPAHSALKVGGRRAYELARAGETVELAARPVRIDAIRLTGYQWPRVEIEIECGAG
TYIRSIARDLGQTLGTGGIIEVLTRTRIGRFRLEEAHAPSDLSLNRLEEVLIAPLEAMIG
RPRVRLTEEQMDAILQGKRLDASVVAWASPPAINDQGEVALVAPESRGGDLVALAEPLGH
SGIVWLQPRRVLATNANPTDFRGVQGM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccctttagttcgtcgctccacggctttctcaacctggccaagccgccgggttgg
acctcgcgggaggtggtcgatttcgtggtccggctgttcccgaggcggagcgctcccaag
gtggggcacgccggcacgctcgacccgctggccacgggggttctggtcgtcgcggtgggc
gaggccaccaagctcatcgaccgggtgcaggctcaaaccaaggtttacaccgccacgatt
cggctgggagccgacagcgacaccctcgacgccgctggcgtggtggtcgaacgcgaccca
gcaggtttggttccgccaagtgtcgaacagattgagaacgctttgcaagagcaggtcggg
actattcaacaggtcccgcccgcgcactccgcgctcaaggtgggcgggcggcgcgcttac
gagttggcccgcgcgggggagacggtcgaactggccgcccgtccggtgcggatcgacgcc
attcggttgacggggtaccaatggccgcgggtcgagatcgagattgaatgcggcgcgggg
acgtacatccggtcgatcgcccgcgatcttggccaaacgttggggactggcggaatcatc
gaggtattgacccggacccgaatcggtcggttccggctggaggaagcccacgcgccgagc
gatctgagcctgaatcgactggaggaggttctgatcgcgccgttggaggcgatgataggc
cgaccccgcgtccgtttgacggaagaacagatggacgccatccttcaggggaagcggctc
gatgcttcggtggtcgcgtgggcgagtccgccggccatcaacgaccagggcgaggtggcg
ctggtcgcgcctgagtcgcggggtggcgacctggtcgcgctggccgagccgctggggcat
tcggggatcgtctggttgcaaccgcgtcgggttttggccaccaacgcgaaccccacggac
ttcaggggggtccaaggaatgtga
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