KEGG   Isosphaera pallida: Isop_0698
Entry
Isop_0698         CDS       T01407                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ipa  Isosphaera pallida
Brite
KEGG Orthology (KO) [BR:ipa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipa03400]
    Isop_0698
Enzymes [BR:ipa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Isop_0698
    5.6.2.6  RNA 3'-5' helicase
     Isop_0698
DNA repair and recombination proteins [BR:ipa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Isop_0698
SSDB
Motif
Pfam: DEAD_assoc DEAD WHD_Lhr Helicase_C ResIII TAD2 AAA_22 Cas3-like_C_2
Other DBs
NCBI-ProteinID: ADV61289
UniProt: E8R183
LinkDB
Position
complement(963927..966923)
AA seq 998 aa
MTRRAPRSSNRAADDPLAGLSHPATRDWFRATFPQGPTPPQRLTWPVVAQHRHALVLAPT
GTGKTLSAFLGVLDRLANHARPPEPVADGLRCVYVSPLRSLGYDVERNLQAPLEGLARRL
GYDRPDQFLRVATRTSDTTAHQRRKLRDRPPHLLVTTPESLALMLSQADWRDHFAAVETI
IVDEIHALAPTKRGVDLMLSLERLADLATTDPTRIGLSATCRPAQRIARYLVGPTRGCVV
LDAWNPVRDDPQTDSNLAPDPQTPVAAAAQTELNNAIVQANSSIRLPDRTPELRVVNLLR
ADEGFHRGLSYRRLLARLEQEIRANRSTVIFANTRAFAERLTHDLRARFHSNVPTPYIGN
AGDLIGNRLCDHQVASRVQLNARLKIEHSRLVRAVSAPPQGHPGDLVADKVTELVAVHHS
ALDATRRREVEHRLKTGQLRAVVTSTSLELGVDLGTADLTVLVGPPDSVQRCLQRVGRAG
HSIEATPRGLIVTVGPAELLSALVTARAAREGRIEPIAVPRVPLDVVCQHLVGMACAGEW
EVERAYELIRRADPTSTLSREDFLDCLSYLAGESSAPASAFEPEPGANPRWSGPRIWKAH
GSFGAKSGRILRWFRMNVGTIHAEETIRVLVDGVELGTLEAVYAERLSRGDRFVLDGRAL
EVVRGEEGGILLARATGGEPNLPRWTSDRLSLSRQLAKEVFATRVQVRDLLRGSPDDLAQ
WLRAEFQHDEPDAVETLRALIEAQERCSVVPESDSVLIEDGPLEDWSGELTNSGSGRLWV
FHAPLGRAACETLGRAVAARWGRRLRRDLGLTAADLGWALRVPAALPPDEDPPEPDWNEL
LDPEGLEQAVLTGLDRGELVAQRFRHAAAVGLMILKRHESQTRNTRGGGSVRVGGTRWAA
TKLYPVVKAAAPRHPLIREAQREALEEVLDLPTARAWLEQRPRVMRRTLQHQPLSPFAAA
WIEPGGGLNPPGETLRFESPASALKRLHERLTRPRVQT
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgacgcgacgcgccccacgctcctccaaccgcgccgcggacgacccactggcaggtctg
agccacccggcgactcgggattggttccgcgccacctttccccaggggccaactcctccg
caacgtctgacctggccggtggtcgcccaacatcgccacgccttggtgctggcccccacc
ggcactggcaagaccctgtcggcgtttctcggcgtccttgatcggctcgccaaccacgcg
cgacctcccgagccggtcgccgacggtcttcgatgcgtttacgtctcccccctgcgaagt
ctgggttacgacgtagagcgcaaccttcaggctccccttgaaggactggcccgccgtcta
ggctatgaccgacccgaccagttcctccgcgtcgctacccgcaccagcgacaccaccgcc
caccagcgccgcaagctgcgcgatcgtcccccccatcttttggtcaccacccccgaaagc
ctcgccctgatgctcagccaggccgattggcgcgaccacttcgccgcggtcgagacgatc
atcgtcgatgaaatccacgcgctggctcccaccaaacgcggggtggacctaatgctcagt
ctggaacgtctggccgacctcgccacgaccgacccgacacggatcggtctgtcggccacc
tgtcggcccgcgcaacggatagcccgctacctggtcggacccacccgcggttgcgtggtt
ctcgacgcttggaacccagtccgcgacgatccccaaaccgattcgaacctcgcccctgac
ccccaaaccccagtcgccgccgcagcccaaaccgaactcaacaacgcgatcgttcaagcg
aactcatcgatccgtttacctgaccgcaccccggaactccgggtcgtcaacctgctccgg
gccgacgagggattccatcgcggcctgtcgtatcgtcggttgttggcgcggctggagcaa
gaaatccgggccaaccggtccacggtcatcttcgcaaacacccgcgcattcgccgaacga
ttgactcacgacctccgcgcacgttttcattccaatgtccctacaccttatatcggcaac
gccggcgatctcattggcaaccgcttgtgtgatcaccaagtcgcctctcgcgttcaattg
aacgctcgcctcaaaattgagcattcgcgccttgttcgagccgtctcggccccgccccaa
ggtcacccaggcgatctggtcgcagacaaggtcaccgagctggtcgccgttcaccattcc
gccctggacgcgacccgtcggcgcgaggtggaacaccggctcaagaccggtcagcttcgc
gcggtcgtgacctccaccagtctggaactgggagtcgatctgggcaccgccgacttaacg
gtgctggtgggaccgcccgactcggtccagcgttgtttgcaacgggtgggccgcgcgggt
cactccatcgaagcgaccccaaggggcctcattgtcacggtgggaccggcagagcttctg
tccgccctagtgaccgcccgcgccgcccgtgagggacgcattgaaccaatcgccgttccg
agagtcccgctggatgtggtctgccaacacctagtcggcatggcctgtgccggcgagtgg
gaggtggagcgcgcttatgaactgatccgacgggcggaccccacttccacgctctcgcgg
gaggatttcctcgactgtctgagctatctggcgggcgaatcgtccgcccccgcctccgct
ttcgagccggaacccggagccaacccccgctggagcggtcctcgaatctggaaggctcac
gggagtttcggggccaaaagcggtcggattcttcgttggtttcgcatgaatgtcggcacc
attcacgccgaggagacgattcgcgtcctagtggacggagtcgaattaggaacgctcgaa
gccgtttacgccgaacgtttgagccgaggcgatcgtttcgttctggatggacgcgccttg
gaggtggtccgaggcgaggaggggggaattctgctggcgcgggccacgggcggcgaaccc
aacctgccccgctggaccagcgaccgcttgagcctcagtcgccaattagcaaaggaggtc
ttcgcaacccgcgttcaggtccgcgacctgctccgaggcagcccggacgatctggcccaa
tggctccgcgctgaattccaacacgacgaacccgacgcggtcgaaaccctccgcgccctg
atcgaagcccaagagcgttgttcggtggtccccgagtccgacagtgttctcatcgaggat
ggaccacttgaagattggtccggcgaattgaccaacagcggctctggccgtctctgggtc
ttccacgccccgttgggacgcgcggcctgtgagaccttggggcgggcggtcgcagcgcgt
tgggggaggcggttgcgccgcgacctgggtttgaccgccgccgatctcggctgggcgttg
cgagtgcccgcggccctcccccccgacgaagatccccccgaaccggattggaacgaattg
ctcgacccggaaggcttagagcaagcggttctgaccgggttggatcggggcgaactggtc
gctcaacggttccgccacgccgccgcggtcggtctgatgattctcaagcgccacgagtcc
caaacccgcaatacccgcggaggggggtcggttcgcgtcggcggcacccgctgggccgcc
acgaagctctatcccgtggtgaaggccgccgcgcctcgacatcctctcatccgtgaagct
cagcgcgaagccctggaggaggtgcttgaccttcccaccgcccgcgcctggttggaacaa
cggccccgggtgatgcgtcggaccttgcagcatcaacccctctcccctttcgccgcagcc
tggatcgaacccggtggcggcttgaacccgccaggggagaccttgcggttcgagtcgcct
gcctccgccctcaaacgtttgcatgaacgtctgactcgcccccgtgttcaaacttga

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