Isosphaera pallida: Isop_0948
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Entry
Isop_0948 CDS
T01407
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ipa
Isosphaera pallida
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipa03009
]
Isop_0948
Enzymes [BR:
ipa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Isop_0948
Ribosome biogenesis [BR:
ipa03009
]
Prokaryotic type
ribosomal protein modification factors
Isop_0948
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADV61537
UniProt:
E8R3H0
LinkDB
All DBs
Position
1340845..1342314
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AA seq
489 aa
AA seq
DB search
MKSDALNPIKGTFSFVTLGCAKNLVDSERMLGLLSQDGYALVPEGEPCDLVIVNTCGFIE
PARKESMAVIHELLDRKRAGTVKGVIVAGCLAERNREELLDQVPEIDQVIGVFGREQIVQ
AADRVLGGLVEQRTIFNPAPIQAQIDRARLRVTPRHLAYLKVSEGCDRLCTFCAIPMMRG
KHVTKPIEEVLREAEELVRDGVRELVLVAQDMTYYGMDLYGEPRLAELLQRLDQLDGLDW
IRILYCYPRHFTDELYATLAGATRIVPYLDMPLQHINDRMLRAMNRRHTKQETIGIIQRL
RAEIPRLVLRTTFIVGFPGETEEQFAELEEFVVQTRFERLGVFPYSYEPDTPAARLKGHL
DEETKLQRRDRIMAAQQPIAFEFNESLVGQTLEVLIDAADLHPRHEGDPFGPDGQPHRWI
GRTYADAPDVDGLTLVSGSGLRPGDLVECRIVAARGYDLEARPTGRPPRRRKLRPRAARG
RGASLPILS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgacgctttgaatccgatcaaagggaccttttcgttcgtcaccttggggtgc
gctaagaatctggtcgattcggagcgcatgttgggcttgctgtcccaggacggctacgct
ttggttcccgaaggcgagccctgcgacttggtcatcgtcaacacctgcggcttcattgaa
ccagcgcgaaaggagtcgatggcggttattcacgagttgctggaccgcaagcgggctgga
acggtcaaaggggtgatcgtggccggttgcttggccgaacggaacagggaggagttgctc
gaccaggttcccgagatcgaccaggtcatcggcgtttttggccgggagcagatcgttcaa
gccgctgaccgggtgcttggcggtttggtcgaacagcgaaccatcttcaacccggctccg
attcaggctcagatcgaccgcgctcggttgcgggtcacgccccgtcacttggcctatctc
aaggtgtccgaaggatgcgaccggctttgcaccttttgcgcgattcccatgatgcggggc
aagcatgtcactaagccgatcgaggaggttcttcgcgaggccgaggaactcgtccgcgac
ggcgtgagggaactcgtgctggttgcccaggacatgacctattacggcatggatttgtac
ggggaaccccgtttggccgagctgcttcagcgtcttgaccaactcgacgggctagactgg
attcgcatcctctactgttacccccgccacttcaccgacgaactttacgcgaccctcgca
ggggccacgcggatcgtgccctacctcgacatgccgttgcagcacatcaacgaccggatg
ctgcgggcgatgaaccgtcgccacaccaagcaggagacgatcggcatcatccaacgcctc
cgcgctgagattccccgcctggtgctgcgaaccaccttcatcgtcggcttccccggcgaa
accgaggagcagttcgccgaactcgaggagttcgtggttcaaacgcgcttcgagcggttg
ggcgtgttcccctactcttatgagccggataccccagcagcgcgtctcaaaggacatctc
gacgaggagaccaaactccaacgccgcgatcggatcatggctgctcagcaaccgatcgcc
tttgagttcaacgagtccctcgtggggcaaactctcgaggtcttgatcgacgccgctgat
ctccatccccgtcatgaaggggatcccttcggacccgacggccaaccccatcgctggatc
ggccgcacctacgctgatgcccccgacgtggatggcctcacgctggtgagcggcagtgga
cttcggcccggcgatctggtcgaatgtcgcatcgtcgcggctcggggttacgacctagag
gcgcggcccactgggcgtcccccccgccgtcgcaagctccgacccagagccgcgcgggga
cgaggcgcgtcgttgccgattctttcttga
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