Isosphaera pallida: Isop_1145
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Entry
Isop_1145 CDS
T01407
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
ipa
Isosphaera pallida
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_2
MCM
AAA_3
HTH_30
Parvo_NS1
AAA_16
bpMoxR
AAA_22
nSTAND3
AAA_7
TIP49
Motif
Other DBs
NCBI-ProteinID:
ADV61732
UniProt:
E8R5I3
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Position
1643409..1644629
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AA seq
406 aa
AA seq
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MAWPGVLVAIRTLGSEPRTALMALMNARDRDRFASADVPDAQDLGIIGESPALREVVRAT
RQVARSRACVLIVGETGTGKELIAHAIHKWSPMASGPYVRVNCGALSENLLESELFGHVK
GAFTSAVENRTGRFEAADHGSIFLDEINSTTPKLQVKLLRVLQEGEFERVGDNKTIRVKT
RVIAATNRDLHLEIESGAFREDLFYRLNVVPIELPPLRERREDIALLTRHFLKRYAELER
RPIPSIHPEALRLLEAHDWPGNVRELQNYIERALVLYDEPELRPEHLPPRLRGEAPTRSI
RVPGRGPRDFDTLAAELVAQGLRDAGPLGRNLYERIIGRVENELIRQVMNACDQVQIKAA
DRLGINRNTLHKKLEAIRDTHTSFQSDTSSNDPPRSDLPGLNSPEG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcctggccaggcgtacttgttgcgattcgcacccttggttccgaaccccgcaccgca
ctcatggccttgatgaacgcccgtgaccgcgaccgcttcgcctctgctgatgtgcctgac
gcccaggatctgggaatcatcggcgagagtcccgcgttgcgcgaggtggtccgtgccacc
cgtcaggtggcgcggtcgcgggcttgcgtcctcatcgtaggcgagaccgggaccggcaaa
gaactgattgcccacgcaatccacaaatggagcccgatggcgtcgggtccttacgtccga
gtcaactgcggcgcactgtcggaaaatcttttggaaagcgaactcttcggccacgtcaaa
ggcgcattcacctcagcggttgaaaatcgcaccggtcgattcgaagcggccgatcatggc
tccattttcctcgacgagatcaacagcaccacccccaaactccaagtcaaactgcttcgt
gtgctccaggaaggggagttcgagcgggtcggtgacaacaagacgattcgagtgaaaacc
cgcgtcattgctgcgaccaaccgtgatcttcatctggagatcgaatccggtgcgtttcgt
gaagacctgttttaccgcctcaacgtggtgccaatcgagttgcccccgcttcgggagcgt
cgcgaggacatcgcgttgttgacccggcacttcctcaaacgctacgccgaactcgaacga
cggcccatcccgtcgattcatcctgaggcgctgaggttgctcgaagcccacgactggcca
ggcaacgtgagggagttgcaaaactacatcgagcgggccttggtcctctacgacgagcca
gagcttcgacccgagcatcttcctccccggttgcgtggcgaagcgccgacgcgatcgatc
cgggttcccggacgaggaccgcgcgacttcgacactctagccgccgaactcgtggcccag
ggcttgcgcgacgcgggacctctaggccgcaacctctatgagcggatcatcggtcgcgtc
gagaacgagttgatccgtcaggtcatgaacgcttgcgaccaggtccagatcaaggcggcc
gatcgtctgggcatcaaccgcaacaccctacacaaaaaactcgaagccatccgcgacact
cacacctccttccagtcggataccagcagcaacgatccacctcgaagcgatttaccggga
ttaaactctcccgaaggatga
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