KEGG   Isosphaera pallida: Isop_1517
Entry
Isop_1517         CDS       T01407                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
ipa  Isosphaera pallida
Pathway
ipa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ipa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Isop_1517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipa03019]
    Isop_1517
   03009 Ribosome biogenesis [BR:ipa03009]
    Isop_1517
Enzymes [BR:ipa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Isop_1517
Messenger RNA biogenesis [BR:ipa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Isop_1517
Ribosome biogenesis [BR:ipa03009]
 Prokaryotic type
  rRNA helicases
   Isop_1517
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Polysacc_deac_2
Other DBs
NCBI-ProteinID: ADV62102
UniProt: E8QYW5
LinkDB
Position
complement(2188557..2189825)
AA seq 422 aa
MIQRIASSPTPPASFAELGLSRLTLAALKTVNYRVPSPIQAAFIPPALEGRDVIGQAKTG
TGKTAAFSLPLIEMHEPGQPGPQAIILAPTRELVQQICGEFERLARGRDLVVRGIYGGEP
IERQLRSLAKGVDVVVGTPGRVIDHLQRGTMSLEGVYHVVLDEADRMLDIGFRPDIERIL
RKVPQPHQTLLLSATLSPEVRRLAARYMHEPVELNLSRDEPSVEKIVQKYIPVDHNRKME
LLLHLLELEKPRQCIVFCRTKRGADKLAQRLARRYPGVATIHGDLPQTARNRVMRGFRDG
SIPILVATDVVGRGIDVEEISHVVNYDIPDDPENYLHRIGRTGRMGKDGVAYTFVGPDEG
IPLTNIEVLINKTLERVVIPGFEVTERGVGVADRSRGRIPISLEGGYRAAAPKPFRQLFS
TA
NT seq 1269 nt   +upstreamnt  +downstreamnt
ttgattcagcgtatcgcgtcttcacccaccccgccggcgagtttcgctgagttgggtctg
agccgcttgaccctcgcagcgctcaagacggtcaactatcgggttccctcgccgatccag
gccgctttcatcccccccgctctggaagggcgggacgtgatcggccaggccaaaaccgga
accggtaaaacggcggccttctccttgcctctcatcgagatgcacgaacccggccaacct
ggtccccaagcgatcatcctcgcgccaacccgtgagttggttcaacaaatctgtggggaa
ttcgagcggctcgcccgtggacgcgacttggtggttcgaggaatctatggcggcgaaccg
atcgaacgccagttgcgttcgctggccaagggggttgatgtcgtcgtgggcactcctgga
cgggtcatcgatcaccttcagcgtggcacgatgagtctggagggggtgtatcatgtcgtc
ctggacgaggccgatcggatgcttgacatcggcttccgtcccgacattgagcgaatcctg
cgcaaagtgccccaaccccaccagaccttgctcctctcggccaccctcagccccgaggtc
cggcgtctggcggcgcgttacatgcacgagcccgtagagctcaacctgtcgcgcgacgag
ccttcggtcgagaaaatcgtccagaagtacattcccgtcgatcacaaccgcaagatggag
ttgctgctgcatctgttggagcttgaaaaaccccgccagtgcatcgtgttttgccggacc
aaacgcggggccgacaagctggctcaacgtttggccaggcgttacccgggtgtcgccacc
attcacggtgacctaccccagaccgcccgcaaccgggtcatgcgcggcttccgcgacggc
tcgattccgattttggtcgccaccgacgtggtgggccgaggaatcgacgtggaggagatc
agtcacgtcgtcaattacgatatccccgacgacccagaaaactaccttcaccgcatcggg
cggacaggacgcatgggcaaggacggcgtggcctacaccttcgtgggtcccgacgaggga
atcccactcaccaacatcgaggtgttgatcaacaagacgttggaacgggtggtcatcccc
ggcttcgaggtcacggagcgtggcgtgggtgtcgcggatcgcagtcgcggtcgcattcca
atttccctcgagggtggttatcgcgcggcggctcccaagccgttccggcagcttttcagc
acggcttga

DBGET integrated database retrieval system