Isosphaera pallida: Isop_1538
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Entry
Isop_1538 CDS
T01407
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
ipa
Isosphaera pallida
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipa03021
]
Isop_1538
03009 Ribosome biogenesis [BR:
ipa03009
]
Isop_1538
Transcription machinery [BR:
ipa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Isop_1538
Ribosome biogenesis [BR:
ipa03009
]
Prokaryotic type
rRNA transcription factors
Isop_1538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
HHH_5
S1
KH_NusA_C
KH_2
KH_1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ADV62123
UniProt:
E8QYY6
LinkDB
All DBs
Position
complement(2223606..2225168)
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AA seq
520 aa
AA seq
DB search
MSLDLPRIIDTIHREKGIPKDLLIDAIQTAILNAARKFFNDSEGLSITIDPQTLKIDATR
GGERVDPAVFGRIAAQTAKQIMIQKFREAERDTLFEEFESQKGDLLTGTVQRFEGGAVLV
NLGKTDAILPRPEQIPGEALHPGDRIRAVVHEVKKQGQRVKIILSRTHPDFVRKLFELEI
PEIADNTIQIRALAREAGYRTKVAVASVDPKVDAVGACVGVRGSRIKTITDELGGERIDI
VRWNDSLQVLIPNALAPAEIDEVMLCGLLGRAIVLVRDDQLSLAIGRRGQNVRLASKLVG
WDIEIMTAEELDEVIDRAIQMFTQIEGVDAELAQNLVEQGILSYDDLSVMEIDDLVATIE
GLDHERAIRIVEAAEELAEQQSEESPRRKGGRGSTSGRNAVSQVQAHSSSVVSAVAVETG
SVASDATDDEAAPQQASVDATAMERESVASETSPSQENELEVSEANEEDHDSVRFNDDPP
PAPVATTGADAAAAVAADAPSTLPQSAPESGGEVRDMNQP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggatttgccgcgcattatcgatacgatccaccgcgagaagggaatccccaag
gatctcctcatcgacgcgatccaaactgccatcctcaacgccgcccgcaagttcttcaac
gactccgagggactgtcgatcaccatcgaccctcaaaccctcaaaatcgacgccacccgg
ggaggcgaacgggtcgatccagcggtgtttggccgaatcgccgcgcaaaccgccaaacaa
atcatgatccaaaagttccgcgaggcggaacgggacacgttgttcgaggagttcgagagt
caaaagggcgacttgctcaccggcacggtccaacgcttcgagggaggagcggttttggtc
aatttgggcaagaccgatgcgatcctcccccgcccggaacagatccccggcgaagcgctc
caccccggcgaccgaatccgggcggtggtccatgaggtcaaaaaacaagggcagcgggtc
aaaatcatcctcagccgcacccaccccgacttcgtgcgcaagctgttcgagttggaaatt
cccgagatcgcggacaacacgattcagatccgagccctggcgcgggaggccggttaccgc
accaaggtagcggtcgcctcggtcgatcccaaggtggacgcggtgggagcatgtgtcggc
gtgcgcggcagccggatcaagacaatcacggacgaactcggcggcgaacgcatcgacatt
gtacgctggaatgactcactccaagtcctgatccccaacgcgctggctcccgccgagatc
gacgaggtgatgctctgcggcctgctgggacgggccatcgtgctggtccgcgacgaccaa
ctctccttggccatcgggcggcggggacaaaacgtccggctcgccagcaaactggtcggg
tgggacatcgaaatcatgaccgccgaggaactcgacgaagttattgatagagcgattcaa
atgttcactcaaattgagggagtggacgccgagcttgctcagaacctggtagagcagggg
attttgagttacgacgacctgtcggtcatggagatcgacgatctggtggcgacgatcgaa
ggtctggaccacgagcgagccatccggattgtggaggcggctgaggagttggccgagcag
caaagcgaggagagcccccggcgcaagggagggcgtggcagcacctcgggccgcaacgcg
gtcagtcaggtccaagctcattcgagttccgtcgtgtccgcggtggcggttgaaacgggg
tcggtggccagcgacgcgaccgacgacgaagccgccccccagcaggcgtccgtcgatgct
accgcgatggaaagggagtcggtcgcgtccgagacgtccccctctcaggagaacgagttg
gaggtttccgaggcgaacgaggaggaccacgacagcgtccgattcaacgatgaccccccc
cccgctccggttgcgaccaccggggcggacgccgccgcggcggtcgcggcggacgctccc
tcaacgcttccccagtcagccccggaatccggtggcgaggtgcgggacatgaaccagcca
tga
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