Isosphaera pallida: Isop_1812
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Entry
Isop_1812 CDS
T01407
Name
(GenBank) RNA polymerase, sigma 38 subunit, RpoS
KO
K03086
RNA polymerase primary sigma factor
Organism
ipa
Isosphaera pallida
Pathway
ipa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Isop_1812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipa03021
]
Isop_1812
Transcription machinery [BR:
ipa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Isop_1812
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ADV62394
UniProt:
E8R1H7
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All DBs
Position
2641262..2642125
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AA seq
287 aa
AA seq
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MSSRRKKNHHASSSLLEVYLKQINETPLLSAAEERELGRRVSEGDYFARDHLVKANLRLV
VSIARGYNGKGLGLDDLIEERNLGLIRAVETFDYSQNIRFSTYASYWIKQSIRRAVMNNG
KPIRLPAYMVTLLAKWRQATTKLTARLGRPPTPEEVGKELRLSPRKIPIVSKAMEVSKLQ
PYSEGDEDTGVPLDDVLIDGNNRSPDELMAHDDDQARMKILLDELDERESAVIRLRFGLD
ESVPEAMTLRQIGERLGLTRERVRQLEQAALTKLAIAFKIDLKDAWL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccgccgcaagaagaaccatcatgcgtcgtcatcgttgctggaggtttacctc
aagcaaatcaacgaaactccactgctaagcgccgcggaggagcgtgagttgggtcgccgg
gtctccgaaggggactacttcgcccgcgatcatctcgtgaaggcgaacttgcggttggta
gtgagcatcgcgcggggttacaacggcaagggtctagggttggacgacctgatcgaggag
aggaacctcggtctaatccgggcggttgagacattcgattacagtcagaacattcggttc
agcacgtatgccagctattggatcaagcagtcgatccggcgggcggtgatgaacaacggc
aagccgatccggctgccggcctacatggtgacgctgctggccaagtggcgtcaagcgacc
accaagctgaccgcgcggctgggccgtccgcccacgcccgaggaggtcggcaaggagctg
cggctctccccgcgcaagattcccatcgtcagtaaggcaatggaggtttccaaactccaa
ccgtacagcgaaggggacgaggataccggagtgcctctggacgacgtgctgatcgacggc
aacaaccggtcccccgacgaactcatggcccacgacgacgatcaagcccgcatgaagatc
ctgctcgacgaattggacgaacgcgagtcggcagtgatccgtctgcggtttggtttggac
gagtcggttcccgaggcgatgaccctgcgtcagatcggcgaacggctgggcctgacccgg
gagcgggtccgccagttggaacaggccgccctcaccaagctggccatcgcgttcaagatc
gacctcaaggacgcctggctgtaa
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