Isosphaera pallida: Isop_2124
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Entry
Isop_2124 CDS
T01407
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ipa
Isosphaera pallida
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipa03019
]
Isop_2124
Messenger RNA biogenesis [BR:
ipa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Isop_2124
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
HDOD
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ADV62704
UniProt:
E8R4A3
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All DBs
Position
3061592..3062719
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AA seq
375 aa
AA seq
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MSTVTNANPPIIPLSQLQHGQEAICFAALSRKEIGTDRHGNPFVKCVFRDRYVERLAPLW
WSNAFREVAANWREGDAFRLHVKGQHLVKYGFQLEIIDARPVVDSDVADGYNYFQLVESS
DREPEDLLRNVRAVIDKAIDEPPLRRLVHAIIDEHQSLFMRMPASQSFHHNYTAGLLEHV
WSMTRIAGFLAEHYARYYHNLNPPLNKGIIVAGAVLHDIGKLFELDYHPVEAKYTIQGKL
IGHVLIGRDMVRETARRLGDVPEETLLLLEHAILAHHGREEFGAPKPPQTLEALILHYID
DLDSKVNAVARQRIKSNGDAPWTDRIGSLNNRQFYRGVPVPPPPLDPTEATHEPPEPRLR
LHKDDREPQTNTRPD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggtgacaaacgcaaatccgccgatcattccgttgtctcagcttcagcatggc
caagaggcgatctgtttcgccgccttgtcgcgcaaggaaatcgggaccgaccgtcacggc
aatccgttcgtcaagtgcgtgttccgcgatcgttacgtcgagcgtctggctccgctgtgg
tggtccaacgcctttcgagaagtggccgccaattggcgggagggggatgcgtttcggttg
cacgtcaaaggccagcatttggtcaaatatggatttcagcttgaaattatcgatgcgcgt
ccggtggtcgattccgacgtggcggacggctacaattattttcagctggtggagtcgtcc
gaccgggaaccggaggatttattgcgcaatgtgcgggcggtgatcgacaaggcgatcgac
gaaccgccgttgcggcggttggttcacgcgatcattgacgagcatcagagtctcttcatg
cggatgccggcctcccagtcgtttcatcacaattacaccgccggtttgctggagcatgtc
tggagcatgacccggatcgccggatttttggcagaacattacgcgcgctactaccacaac
ctcaatcccccgctcaacaaggggatcatcgtggccggggcggtgttgcacgacattggc
aagctgtttgaactggattaccacccggttgaggccaaatacaccatccaaggcaagttg
attggtcatgtgctgatcggtcgagacatggtccgcgagacggcgcggcggctgggcgac
gtgccggaggagacgttgttgttgctggaacacgcgatcctcgcccaccacggccgggag
gaattcggcgcgcccaagccgccgcaaaccttagaggcgttgattctccattacatcgac
gacctcgacagcaaggtgaacgcggtggcccgccagcggatcaagtccaacggcgacgct
ccctggaccgaccggatcggctcgctgaacaaccgacagttttatcgcggtgtgccggtt
ccaccgccgccgttggaccctaccgaggcaactcacgagccgcccgaaccaaggttgcgg
ttgcataaggacgaccgcgaaccccaaaccaacaccagacccgattga
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