Isosphaera pallida: Isop_2133
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Entry
Isop_2133 CDS
T01407
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ipa
Isosphaera pallida
Pathway
ipa00260
Glycine, serine and threonine metabolism
ipa00460
Cyanoamino acid metabolism
ipa00630
Glyoxylate and dicarboxylate metabolism
ipa00670
One carbon pool by folate
ipa00680
Methane metabolism
ipa01100
Metabolic pathways
ipa01110
Biosynthesis of secondary metabolites
ipa01120
Microbial metabolism in diverse environments
ipa01200
Carbon metabolism
ipa01230
Biosynthesis of amino acids
ipa01240
Biosynthesis of cofactors
ipa04981
Folate transport and metabolism
Module
ipa_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Isop_2133
09102 Energy metabolism
00680 Methane metabolism
Isop_2133
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Isop_2133
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Isop_2133
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Isop_2133
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Isop_2133
Enzymes [BR:
ipa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Isop_2133
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ADV62712
UniProt:
E8R4B1
LinkDB
All DBs
Position
complement(3074900..3076252)
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AA seq
450 aa
AA seq
DB search
MFDHDPANASKSASFAPSLSRVDPELAAAIAAERVRQRDELELIASENYTSAAVMEAVGS
VLTNKYAEGLPGKRYYGGCEHVDTAESLAIERAKRLFGADHVNVQPHSGASANQAVYFAA
LEHGDSVLAMDLAHGGHLTHGMKLNYSGRWYPTTGYGVDPATERIDYDQIARVAREIKPR
LLLAGASAYSRVIDFPTLRQIADDVGALFMVDMAHIAGLVAGKVHPSPFPLADFVTTTTH
KTLRGPRGGLAFCKADWAKKIDSAVFPGLQGGPLMHVIAGKAVCLHEALQPSFAVYARRV
VENAQVLAEELLQAGFKLVSGGTDNHLVLLNVASKGLGGKLAEQALGRAGITVNKNLIPF
DTRKPMDPSGIRLGTPALTTRGLGPDEFRQVAHWIVQTLDAPEDHDRAARIAREVAEFLR
AYPVPGIPADEDNSPGHQAVSIQGRVTLQV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatcacgaccctgccaacgcctccaagtctgcttcgttcgccccgtcgttgagt
cgggtcgatcccgaactcgccgcggccatcgccgccgaacgggttcgccagcgcgacgag
ttggagttaatcgcctcggaaaactacaccagcgccgcggtcatggaggcggtcggctcg
gtgctgaccaacaagtacgccgaggggttgccgggcaagcggtattacgggggttgcgag
catgtggacaccgccgagtcgctggcgatcgagcgggccaagcggctgttcggggccgac
catgtcaacgttcaaccccactcgggtgcctcggccaaccaagcggtttacttcgccgcc
ctcgaacacggcgactcggtgttggcgatggaccttgcccacggcggtcacctcacccac
ggcatgaagctcaactactcgggacgttggtaccccaccacggggtacggcgtcgatccg
gccaccgagcgaatcgactacgaccagatcgcccgcgtcgcccgcgagatcaagccccgg
ttactgctcgccggagccagcgcctattcccgcgtcattgactttcccacccttcgacaa
atcgccgacgacgtcggggcgctattcatggtggacatggcccacatcgccggactcgtg
gcgggcaaggtccaccccagcccgttccctctggccgatttcgtcaccaccaccacccac
aagaccctgcggggaccccgaggcggtctggccttctgcaaggcggactgggccaaaaag
atcgactcagccgtgttccccggcctccagggcgggccgctgatgcacgtcatcgccggc
aaggcggtttgcctccacgaagcgctccagccctcctttgccgtttacgcccggcgggtt
gtggagaacgcccaagtgttggccgaggaactgctccaggccggcttcaaactggtctcc
ggcggcaccgacaaccacctcgtgctgctcaacgtcgcctccaagggactcggcggcaaa
ctcgccgaacaggccctgggacgcgcgggcatcaccgtcaataaaaacctgatccccttc
gacacccgcaagccaatggaccccagcggcatccgtctgggtacccccgcgctaaccacc
cgcggcctgggccccgacgaattccgccaagtcgcccactggatcgtccagaccctcgac
gcccccgaggatcacgatcgcgccgcccggatcgcccgcgaggtcgccgaattcctccgc
gcctaccccgtgcccggtatccctgcggacgaggacaattcccccggccatcaggcggtt
tccatccaaggtcgtgtcactttacaagtgtaa
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