Isosphaera pallida: Isop_2169
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Entry
Isop_2169 CDS
T01407
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ipa
Isosphaera pallida
Pathway
ipa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Isop_2169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipa03400
]
Isop_2169
Enzymes [BR:
ipa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Isop_2169
DNA repair and recombination proteins [BR:
ipa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Isop_2169
Prokaryotic type
Isop_2169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
ADV62748
UniProt:
E8R4Z1
LinkDB
All DBs
Position
3129807..3130640
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AA seq
277 aa
AA seq
DB search
MARSRNEDSRDMPLFGKFDPSPSPVHAPPAAPPVRVEPIAQPSQVQPLPLVPGLPPLPLA
WRIALGRRVEQSKYEEIGAFVAAERRIGTVYPPHDQVFAAFEATPPDQVKAVLLGQDPYH
GPGQAHGLCFSVRPGVPIPPSLVNILQELQNDLGFPPPRHGDLRSWANQGVLMLNTVLTV
RSGQANSHRGRGWEEFTDAVIAEISAGPHPVVFILWGNPAKAKRKLIDVNRHAIVQSAHP
SPLSAHHGFFGSRPFSQVNRALARFGRAPIDWRLSDP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcccgatcccgcaacgaggattcccgcgacatgccgcttttcggcaagttcgacccg
tctccatctcccgtgcacgcgccgcccgcggcgcctccggttcgagtcgagccgatcgcg
caaccgagtcaggtccaaccgctaccgttggttcctggcctgccgccgttgccattagct
tggcggatcgcgttggggaggcgagtggaacaatccaagtatgaagaaattggcgcattt
gtggccgccgagcgtcggattgggacagtctacccgccccatgaccaggtctttgccgcc
ttcgaggcgaccccgcccgaccaggtcaaggcagttttgctgggtcaggatccctaccac
gggccgggccaggctcacggtctttgcttctcggtgcgtccaggggtgccgattccgccc
tctttggtgaacatcctccaggaacttcagaacgacctgggctttccaccgccccgtcat
ggcgatttgcggtcttgggcgaatcaaggagtgttgatgttgaacaccgtgctcacggtt
cgctctggtcaggccaactcgcatcgtgggcggggctgggaggagttcaccgacgcggtc
atcgccgaaatcagcgccgggcctcatcccgtggtgttcattctctggggcaatccggcc
aaagctaaacgcaagttgatcgacgtgaaccgtcacgcgatcgtccaatcggcccacccc
tcgccgctctcggcccaccacggctttttcggcagccggccgttttcccaggtcaaccgg
gcgttggcgcggtttggtcgcgcgccgatcgactggcgtttgagcgacccctga
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