Isosphaera pallida: Isop_2309
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Entry
Isop_2309 CDS
T01407
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ipa
Isosphaera pallida
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipa03019
]
Isop_2309
Messenger RNA biogenesis [BR:
ipa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Isop_2309
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ADV62887
UniProt:
E8R6H6
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All DBs
Position
3368986..3369993
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AA seq
335 aa
AA seq
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MPRRSLADLAPGDLVDDVFLVASKQSRADRQGNLYLTLDLRDPTGNISARVWNVTKSLAD
SFESGDFLKVRAKAQYAQGITQLVVSHLEAVDPARLGLDPAAFLPKAPVSIAVLTSQLRG
FLKSLDDPHLKALCDAFLMDDAFLADFTAVPAGVREHHAYQGGLLEHVVAMMTLASTVGE
LYPEVNRDLLLVGCFLHDVGKVRELSHQRGFDYTDEGQLVGHLSLGVSMVEEKLPLVQRL
LGEPFPPETLLRIKHMILSHHGTLEFGSPKLPMTPEAVALHHLDALDSKLHAALREIRDD
PDTASRWTRYDPKRNRRLFKGSAPPAAGEGEEDLD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgacgatccctcgccgatctcgcgcccggcgacctggtggatgacgttttcctc
gtggcctccaagcagtcgcgggccgatcgtcaagggaatctgtacttgaccttggatctg
cgcgaccccaccgggaatatctcggcgcgggtctggaacgtgaccaaaagcttggccgac
tcgttcgagagcggtgacttcctcaaggttcgcgccaaggcgcagtatgcccaagggatc
acccagttggtggtctcgcatctcgaggcggtcgatccggctcgcctgggattggacccg
gccgccttcctgcctaaagccccggttagcatcgccgttctgaccagccagttgcgcggc
tttctcaagagcctggacgatccccacctcaaagcgctttgcgacgccttcttaatggac
gacgccttcctcgccgacttcaccgccgttcccgcgggcgtgcgtgaacatcacgcctac
cagggcggtttgctggagcacgttgtggcgatgatgaccctggcctccacggtcggcgaa
ctctatcccgaggtcaaccgcgacctgctgttggtcggttgcttcctgcatgatgtcggc
aaagtccgcgagttgtcccatcaacgcgggttcgactacaccgacgaaggccaactcgtc
ggccatctcagcctgggcgtttcgatggtcgaggagaaactgcccctggtccaacggctt
ctcggcgagccattcccgcccgaaaccctcttgaggatcaagcatatgatcctcagccat
catggaaccctcgaattcggcagtccgaaactacccatgacgcccgaagccgtggcgcta
caccacctggacgccctcgactcgaagctgcacgcggcgttgcgcgagatccgcgacgac
cccgacaccgcgtcgcggtggactcgatacgaccccaagcgcaaccgacgcttgtttaaa
ggatcggccccccccgccgccggagaaggcgaggaggatctcgattga
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