Isosphaera pallida: Isop_3274
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Entry
Isop_3274 CDS
T01407
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ipa
Isosphaera pallida
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipa03032
]
Isop_3274
03400 DNA repair and recombination proteins [BR:
ipa03400
]
Isop_3274
Enzymes [BR:
ipa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Isop_3274
DNA replication proteins [BR:
ipa03032
]
Prokaryotic type
DNA Topoisomerases
Isop_3274
DNA repair and recombination proteins [BR:
ipa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Isop_3274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADV63836
UniProt:
E8R583
LinkDB
All DBs
Position
4781830..4784550
Genome browser
AA seq
906 aa
AA seq
DB search
MARRVGGRSGLGGREERLLRRAQSQGEVVEEVSLAEATRSRYLNYALSVITSRALPDVRD
GLKPVQRRILYAMWADLKAGATGRFVKSAAVVGEVMKSYHPHGDQSIYDALVRMAQDFSL
RCPLIEGYGNFGSIDGDPPAAMRYTEARLTAAAEELLVELREQTVEFRANYAATTREPVV
LPARWPNLLVNGASGIAVGMATTIPPHNLKEVCNALIALLDNPEITIDKLHRHLPGPDFP
TGGVVLNSAEDLRGIYANGHGTIKLRGTWEPHPERKEAVVITSIPYGVEKDDLVAKIGEL
IGKGQVPQLVNVKDLSDEAIRIVLDLRPGANAEAAMAYLYKNTSLQINHHVNMTCLLPAL
PNQRVGDNADATAVRATLADELEPFDLDESEWDADAAASDPASTTLAAGLDQGEERSASV
PERLDLKTMLSHFLDFRMEVVIRKLRHELRQVRRRIHILEGFEIVFNRLDEAIRLIRASN
GKADAAPKLATRFGLSALQADAILETKLYRLGKLEIDEILRELAERRARAEELRRLLGDE
AARKGLIRDDLKRIAKTYGTPRRTRIEGPAPEVEFREEDYIVDEDAWVIVTRDGWIKRQR
SFTDIESIRVRDGDRVGWLFRARARRTLTVLTSRGMAYTTRVHDLVMTTGHGEPISKLFS
LEDNERIVGVVCHDPRCLPVHADPADHAAPKRQGVLLATAASGEESSSDNSQPQPPYVVV
VTAGGKALRFSLAALAAVSTRKGRAVMRPDPDRPNDEVVAALVSNGHDQVMLATTSARVI
RFAVTEIPVVSGPAKGVLAIRLQDETDRVLGVLLTDRAQDTLTVKTSRGGTLELKAGKHP
LTSRGGKGTGVLQRGTLVEVLPHPVQPWPSLDQAQTDADAHAHALTVDHAAHPNGAAAST
NGHPRR
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggccagacgagttggcggtagaagtggcttaggcggtcgggaggaaaggctcctgaga
agagcgcagtcccaaggcgaggtggtcgaggaggtgtcactggccgaggcgactcggtcg
cgttatctcaactatgcgctgagcgtaatcacctcgcgcgcgcttccggatgtgcgtgac
ggtctcaagccggtgcaacgccgcatcctttatgcgatgtgggctgacctgaaggccggg
gccactgggcggttcgtaaagagcgcagcggtggtcggcgaagtcatgaagagctaccac
ccccacggcgaccagtcgatctacgacgcgctggtgcggatggcccaggacttcagccta
cggtgtccgttgatcgagggttacggcaacttcggctcgatcgacggcgacccgcccgcg
gcgatgcggtacaccgaggcccgcctgaccgccgcggccgaggaattgctggtggagctt
cgggagcagacggtcgagtttcgggcgaattacgccgccaccacccgcgaacccgtggta
ttgcccgcccgctggcccaatcttctcgtcaacggcgcgtcggggatcgcggtggggatg
gccaccaccatcccgccccacaacctgaaggaagtctgcaacgccctaatcgcgctgctg
gacaaccccgagatcaccatcgacaagctgcaccgccacttgcctggtcctgactttccc
accggcggggtggtgctgaactccgccgaggacctacgcgggatttacgccaacggccac
ggcaccatcaaactgcgcggcacctgggaaccccaccccgagcgcaaggaggccgtggtc
atcacctcgatcccctacggagtcgaaaaagacgacctggtagctaagatcggcgaactg
atcggcaagggtcaggttccccaactcgtcaatgtcaaggacctcagcgacgaggcgatc
cggattgtgctggacctgcgcccgggagccaacgccgaagcggcgatggcgtatctgtat
aaaaacacgtcgctccagatcaaccaccacgtcaacatgacttgcctgctgcccgctctg
ccaaatcagcgggtcggggacaacgccgacgcaacggccgttcgggcgaccctcgccgac
gagttggagccattcgacctcgacgagtcggagtgggatgccgacgccgccgcaagcgac
cccgcctccaccaccctcgccgcgggtttggatcagggggaggagaggtcggcctcggtg
cccgaacggctcgacctcaagacgatgctaagccacttcctggacttccgcatggaggtg
gtgatccgcaaactccgccacgagttgcggcaggtgcggcgacgcatccatattctggaa
ggcttcgagatcgtgttcaaccgcctggacgaggcgatccgtctgatccgggcctccaac
ggcaaagccgacgccgctcccaagctggcaacccggtttggtctctcagcgctccaggct
gacgcgattctcgaaaccaagctgtatcgtctgggcaagctggagatcgacgagatcctc
cgcgagctggccgaacgccgcgctcgggctgaggaactgcgccgccttctgggcgacgag
gcggcccgcaaggggctgatccgcgacgacctcaaacggatcgccaagacctacggcacc
ccgcgccgcactcggatcgagggacccgcccctgaggtggagttccgcgaggaagactac
atcgtggacgaggacgcctgggtgatcgtcacccgcgacggctggatcaaacggcaacgc
tccttcacggacatcgagagcattcgggtccgcgacggcgaccgcgttggctggctgttc
cgcgcccgggcgcgacgaaccctgaccgtcttgacctcgcgggggatggcctacaccacc
cgggtccacgacctggtgatgaccaccggccacggcgaaccgatctcgaagctgttcagc
ttggaggacaacgaacgaatcgtgggcgtggtttgtcacgatccccgctgtctgccagtt
catgccgaccccgccgatcacgccgcgcccaagcgtcaaggcgtcctgttggcgaccgcc
gcctcgggcgaggagagttccagcgacaatagccagccccaaccgccctacgtcgtggtc
gtcaccgccggcggcaaggcgctgcggttctcgttggcagcgctggcggcggtctcgacc
cgcaagggacgagcagtcatgcgtcccgaccctgaccgccccaacgacgaagtggtcgcc
gccctggtcagcaacggtcacgatcaagtaatgctggccaccacctcggcgcgggtgatt
cgcttcgccgtaaccgagataccggtggtctccggtccagccaaaggggtactggcgatc
cgccttcaagacgaaaccgaccgagttttgggcgtgctcctgactgaccgcgcccaggac
accctaacggtcaaaaccagccgcggcggcacgctggaactcaaggcgggcaagcatccc
ctcaccagccgcggcggcaaagggaccggcgttttgcaacgcggcacgctcgtcgaggtc
ctccctcacccggttcaaccgtggcccagtttggatcaagcccagaccgacgccgacgcc
cacgcccacgccctcaccgttgaccacgccgctcaccccaacggcgcggcggcctcgact
aacggccacccccgccgctga
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