Isosphaera pallida: Isop_3475
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Entry
Isop_3475 CDS
T01407
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
ipa
Isosphaera pallida
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ipa03012
]
Isop_3475
Translation factors [BR:
ipa03012
]
Eukaryotic type
Elongation factors
Isop_3475
Prokaryotic type
Isop_3475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
GTP_EFTU_D2
MMR_HSR1
FeoB_N
GTP_EFTU_D4
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ADV64032
UniProt:
E8QWZ3
LinkDB
All DBs
Position
complement(5089560..5091560)
Genome browser
AA seq
666 aa
AA seq
DB search
MNSYVPLVLGTAGHIDHGKTALTRALTGVDTDRLPEEKARGITIDLGFASLRLGRYELAV
VDVPGHERFVRNMLAGAGGFDVALLVVAADDGIMPQTREHFEILKLLGIPQGVIALTKRD
LVEPEWLDLVRADLRSLIVGSFLEGCEIVPTSTVSGEGLAELKEALERACHRVAERPRPD
PGRFRLAIDRVFTREGLGVIVTGTVVSGAVTVGEDLECWPLGRLVKVRGLQRHGRGVERV
ERGARAAIHLGGIKQTDLARGHELATPGYLNASRRLTVELRVACDAPRPLRHRGRYRLHL
GSGEVNAGLILLRNEEGRPVSQLDAGQTGLGQLVVARPVTAVFDQPFILRETTPPTTLGG
GRVLQPEAGPIRRRDAVLIERAQRLAQAHDPVERLERAVALIPPDPDRLTPSSLCRTTGL
TPEVAAAAWAELKRTGMILDLAIGPRRALSVTREVVEEWERRVEAALTRLHAARPRQSTI
PRGHLAAELADLAQRGGEPLIATLLERLRDRGRILIEGDPPARVARIDHQPRLSQSERKL
KSELLQAITSAGLEPPDLKSLTTRLGIKKPSLAVELLTLLVEEERIVEVAPGLWYDAQIE
AEIRRRVTARLKQVETMSMAELRDLLGTTRKYALPLGEYLDRVGVTLRDGDHRRLGPAAR
LDEPID
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgtatgttcctctggtgctgggcactgccggtcacatcgaccacggcaagacc
gcgttgacccgcgccttgaccggagtggacactgaccgtctgcccgaggaaaaagcgcgg
ggaatcacaatcgacctgggattcgcctccctgaggctggggcgctacgagttggcggtg
gtggatgtgccgggccatgagcggttcgtccgcaacatgctggccggggccggtggcttc
gacgtggccctgctggtggtcgccgccgacgacgggatcatgccccagacccgcgagcat
ttcgagattcttaagcttttggggattccccaaggcgtgatcgccttgaccaagcgcgat
ctggtcgaacccgaatggctcgacctggtgagggccgatttgcgaagcctgatcgtcggg
tcgtttctggagggctgcgagatcgtgccgacctcgacggtcagtggcgagggcctcgcc
gagttgaaggaggcgctggagcgggcctgtcaccgggtggcggaacgtccccggcctgat
ccgggtcgatttcggttggcgattgatcgagtgttcacccgtgaaggtctgggggtcatc
gtcactggcacggtggtctctggggcagtgacggtgggggaggatctggaatgctggccg
ctgggccgtctggtcaaggttcgcggtttgcagcggcatggacggggcgtggaacgggtg
gaacggggcgctcgggccgcgatccatcttggaggaatcaagcagactgacctggcgcgg
ggtcacgaactggccacgccgggatacctcaacgcgagtcgtcggctgacggttgaactg
agggtggcctgcgacgcgccccgcccactgcgtcaccggggccgttatcgtcttcatctg
ggcagcggcgaggtgaacgcgggtttgatcctgttgcgcaacgaggaggggcggcccgtc
tcccaactggacgccgggcaaactggcctgggccaactagtggtggcccgtccggtgacg
gcggtgttcgatcaaccgttcatcctgcgagaaaccacgccgccgaccaccctgggaggc
ggacgggtgctccagccagaggccggaccgatccgccgccgcgacgccgtgttgatcgaa
cgggcgcagcggttggcccaagcacacgatccagtcgagcggctggaacgggctgtggcg
ttgatcccgcccgaccccgaccgtctcacaccgagttccctttgtcggaccaccggcctg
actcccgaggtcgccgcggcggcgtgggccgagttgaaacgaaccgggatgattcttgac
ctagcgatcgggcctcgaagagcgctgagcgtcacccgcgaggtggtcgaggagtgggaa
cgtcgggtcgaagcggctctgactcgtttgcacgcggctcgcccccgccaatcgaccatc
ccccgtggccacctcgccgccgaactcgccgatctggcccaacgcggcggtgaaccgctg
attgcgaccctgttagaacggttgcgcgaccgcgggcgaattctgatcgaaggcgacccg
cccgcccgagtcgcgcgcattgaccatcagcctcggctcagccaaagcgaacgcaaactc
aagagcgaattgctccaggcgatcacctccgccggtctggaaccacctgatttgaagtcg
ctgacgacccggttggggatcaaaaagccctcgctggccgtcgagttgctcaccttgttg
gtcgaagaggagcggatcgtcgaggtcgcgcccgggctttggtacgatgcccagatcgag
gcggaaattcgccgtcgagtgaccgcgcgcctcaagcaggttgaaacgatgagcatggcc
gaattacgcgacctgctgggcacgacccgtaaatacgccttgccgctgggagaatacttg
gatcgcgtgggagtcaccctgcgggatggcgatcatcgccggttgggtccggcggcgcgt
ctcgacgaaccaattgattga
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