Isosphaera pallida: Isop_3480
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Entry
Isop_3480 CDS
T01407
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ipa
Isosphaera pallida
Pathway
ipa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Isop_3480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipa03019
]
Isop_3480
03016 Transfer RNA biogenesis [BR:
ipa03016
]
Isop_3480
Enzymes [BR:
ipa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Isop_3480
Messenger RNA biogenesis [BR:
ipa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Isop_3480
Transfer RNA biogenesis [BR:
ipa03016
]
Prokaryotic type
tRNA degradation factors
Isop_3480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_PNO1_2nd
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ADV64037
UniProt:
E8QWZ8
LinkDB
All DBs
Position
5094888..5097188
Genome browser
AA seq
766 aa
AA seq
DB search
MHSAPTAGIPPVKRPVRVEATIGDKLLILETGKLAKQATGSVVVQVGGTMSLVAVVTAPG
REGLDFFPLQVEYREKVYAAGKFPGGFIKREGRPTTKDILTSRLIDRPIRPLFPEWYRDE
VQIQASPISADRINDPDVLSMIGASAALCLTPAPFLGPVGSIRVGRIDGRLVPLPTAEEM
EQSDLDLVVASTTSKIVMIEGFGQELPESEMFDAIMKAHEYNQAVIALQHELRAAVGLPP
MEPPPPRHDPLVDYLYQRYGDEIRQAKRIVAKLERYAVMDQLRARVVAETTAAPVPGVGD
PETPPTELAVKAAFKEAETRVVRAMILDGLRSDGRGPKDLRPISCEVGLLPKAHGSALFQ
RGETQALVTTVLGTAADEQRIDGIMDEYTKKFMLDYNMPSFAVGEVRPIRGPGRREIGHG
ALAERSVAPVLPDPARFPYTIRVVSDILESNGSSSMASVCGATLSLMDAGVPISDPVGGI
SIGLVWDEPTDRFVLLTDIIGDEDHYGDMDFKVAGTQRGVTGIQLDLKNLGISPRIVRET
LDQALEARMEILRTMLRSIKRPRDHISENAPRLIQIQVNPEKIGLIIGPGGKTIRRLEEE
TGAKIEIDNSGVITISCVRAEGAQDARDRIQGMTEGVQVGKIYDGRVSSIKDFGAFVEIL
PGKDGLVHISELTEGYVSSVADVCKVGDVMPVKVILVDEQDRVKLSRKAALAELGQVDPL
AEAVPAPGGAAPRPAPSGGDRGGYDRGGSPRRGGGGGGGGGGGRRS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcactccgcgccgaccgccggcatcccgccggtgaagcgacccgtccgcgtcgaagcg
acgatcggcgacaagctgctcatcctcgaaaccggcaaactcgccaaacaggccaccggc
tcagtggtggttcaagtgggtggcacgatgagcctggtggcggtggtcaccgcgcccggc
cgcgagggactggactttttcccccttcaggtcgaataccgcgagaaggtgtacgccgcc
ggcaaattccctggcggcttcatcaaacgtgaaggtcgtcccaccaccaaggacatcctg
acctcccgtctgatcgaccggccgattcgtcccttgttcccggagtggtatcgcgacgag
gtccagattcaggccagccccatctcggccgaccggatcaacgaccccgacgttctgtcg
atgattggcgcgtcggcggcgctctgtttgaccccggccccgttccttgggccggtcggc
tcgatccgtgttggtcgaatcgacgggcgactcgttccgctacccaccgccgaggaaatg
gagcagagcgaccttgatctcgtcgtcgctagcaccacctcgaaaatcgtcatgatcgaa
ggattcggccaggaactgcccgagtccgagatgttcgacgcgatcatgaaggcccacgag
tacaaccaagccgtgatcgcgcttcagcatgaattgcgggccgcggtcggtctgccgccg
atggagccgccgccgccccgtcacgatcccctggtggactacctctaccaacgttacggc
gacgagattcgtcaggccaagcggatcgtggccaagctggaacgctacgccgtcatggat
caactcagggcgcgcgttgtggccgagaccactgctgcgcccgtgcccggtgtgggcgac
cccgagaccccgccaaccgagttggcggtcaaggccgccttcaaagaggccgagacccgg
gtggttcgagccatgattctggacggtctccgttccgacggccgcggccccaaggacctg
cgacccatctcctgcgaagtcggcctgctgcccaaagcccacggctcggctctgttccaa
cgcggcgaaacccaggcattggtgaccaccgtgctgggcaccgccgccgacgaacaacgc
atcgacggcattatggacgagtacacaaagaagttcatgttagactacaacatgccctcc
ttcgcggtgggcgaggtgcgaccgatccgtggtccgggccgtcgcgagattggccacggg
gcgctggctgagcgttcggtggctccggtgctgcccgacccagcccgctttccctacacc
atccgggtggtctccgacattctcgaatccaacggctcctcctcgatggcgtcggtctgc
ggagcgaccctcagcctaatggacgccggcgtgccgatcagcgatccggtcggcggcatc
tcgattggtttggtgtgggatgaacccaccgaccgcttcgtgctgctgaccgacatcatc
ggcgacgaggaccactatggcgacatggacttcaaggtcgccggcacccagcgcggcgtc
accggcatccaactggacctcaagaacctagggatctcgccccggatcgtccgcgaaacc
cttgaccaggcgctggaagcccgcatggagatcctccggaccatgctccgctcgatcaag
cggccccgcgaccacatttcggaaaacgccccccgcttgatccagattcaggtcaatccc
gaaaagatcggcctcatcatcggacccggcggcaagacgatccgccggctcgaagaagag
accggggccaagatcgagatcgacaactcgggcgtcatcaccatctcctgcgttcgagcc
gaaggcgcgcaggacgctcgcgaccgcatccaggggatgaccgaaggagtccaagtgggc
aaaatctacgacggccgggtctcctcgatcaaagactttggcgcgtttgtcgaaatcctg
ccgggcaaagatgggttggtgcacatctccgaactgaccgaagggtatgtgtccagcgtg
gccgacgtctgcaaggtgggtgacgtgatgccggtcaaggttatcctggtggacgagcag
gatcgggtcaagctgtcgcgcaaggcggcgctggccgaactcggtcaagtcgatcctcta
gctgaggccgttccggctccagggggcgctgcgcctcggccggctccctccggcggcgac
cgcggaggttacgatcggggcggatcgccgcgacgcggcggtggcggtggcggcggtggc
ggcggtggtcgtcgctcctga
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