Ignicoccus pacificus: IPA_01425
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Entry
IPA_01425 CDS
T08506
Name
(GenBank) extensin
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
ipc
Ignicoccus pacificus
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipc03400
]
IPA_01425
Enzymes [BR:
ipc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IPA_01425
DNA repair and recombination proteins [BR:
ipc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
IPA_01425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
ResIII
Helicase_C
HHH_5
DEXQc_Suv3
AAA_22
HA2_N
HTH_61
DNA_pol_lambd_f
ATPase_2
ATPase
IMS_HHH_1
AAA_16
Cdd1
Zot
AAA
AAA_19
AAA_30
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
UXD21216
UniProt:
A0A977K933
LinkDB
All DBs
Position
complement(249374..251458)
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AA seq
694 aa
AA seq
DB search
MIPRDVEEWLRSRGIEELYPIQRKAIERGLFEGRSLLVSAPTGSGKTLVAEMAIANALFE
GKKAIYLVPLRSLAFEKVKGLREAFEGYKVEASVGDYHSPKVEDAEVLVATYERMDSLLR
HSSPWLREVGVVVIDEVHYVGDEERGPVLETIVTQLKRKGFQMIALSATVGNLGEIADWL
GAELVTDSWRPVPLKEGVMENREYVVWFEDSEEEIPRVTGSAPIDAALHFLKKGQVLYFA
TTRRNAERAAKRVAERLPVTKKGEYWAERAKIEVEGELGERLASLIRRGAGFHHAGLTNE
AREVVEEAFRAGAIRFLAATPTLAAGVNLPARTVIIEDHYRFERFGRVPIKVAEYKQMAG
RAGRPGLDEHGTSVLVTRDDVDEVFERYVKGKPESVISSLVSPRALRRTVLGLLASGFAR
NYEELKEFIEDTLYAQQVGNPRDALEEMDRAVRFLVKLGALDKEARITEFGRKISLVYVD
PLGVKIVLKYLKRRKGKGSALGYLHLISLTPDMPKRSLRSNEFKRLYEVYQELEVDLIAM
NIEEFEDEELFLSALKTALILKDWADEVPEDEIAKKYSVYPGDVRVFADTAAWLVHAYSE
LASFKGMKIHAESLAKLELRMKYGVREELVELVSIPYIGRSRARKLWESGIRSKDDLIQA
GERRLASILGPKVAKRVLMEIQGKKEVTLRSFFG
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
ttgattcccagggacgtggaggagtggctgaggagcagaggaatagaggagctctatccg
atacagaggaaggcgattgagagggggttgttcgaggggaggtcactcctcgtatcggcc
cccacgggatcgggaaagacgctagtggcggaaatggcgatagcgaacgctttattcgag
gggaagaaggcgatttacctagttccgcttaggagtttggcatttgaaaaggtgaagggt
ctgagggaggcgtttgagggttacaaggtagaggcgagcgttggtgattaccatagtcct
aaagtagaagatgctgaagtgctggtagcgacgtatgagagaatggactccctcctaaga
cactcctccccttggcttagggaagtgggagtcgtagtgatcgatgaagtacattatgtg
ggagacgaggagagagggccagtgctcgagaccatagtaacccagcttaagagaaagggc
ttccagatgatagcgctttcggcgaccgtaggcaacctgggggagatagcggactggctg
ggagcggagttagttacggatagctggagacccgttcccctcaaggaaggggtaatggaa
aacagggaatacgtggtatggttcgaggactcggaggaggagatacccagggtaaccggt
tcggcaccgatagacgctgccttacactttttgaagaaaggtcaggttctctactttgct
acaaccaggaggaacgctgagagagctgctaagagggtggcagaaaggcttccggtgacc
aaaaagggggagtactgggcggagagggccaagatagaggtcgagggggagctgggagaa
aggctcgcctccctgattaggagaggtgccggcttccaccacgccggtctcacgaacgag
gctagggaggtggtcgaggaggcctttagggccggagcgataaggttcttagccgcaact
cctaccctagcggccggagtcaaccttcctgccaggaccgtcataatagaggaccactac
cgcttcgagaggttcggtagggttccgattaaggtggcggagtacaagcagatggccggg
agggctggaaggcccggcttagatgagcacgggacctcagtcctagtgacgagggacgac
gtggacgaggtcttcgaaagatacgtaaagggtaagccggaaagcgtgataagctccttg
gtctcccctcgagccctaaggagaaccgttttggggctcctagctagcgggttcgcaagg
aactacgaggagctaaaggagttcatcgaggataccctttacgctcaacaagtggggaac
cctagggacgccctagaggaaatggacagagctgtgaggttcctcgtaaagttaggagct
ttagacaaggaagctagaataaccgagttcggaaggaagatatcattggtctatgtggat
ccgttgggagttaagattgtgctaaagtacttgaagaggaggaagggtaagggaagcgct
ttaggctacctccacttgatctccctaacccctgacatgcctaagaggtctcttagaagt
aacgagttcaaaagattgtatgaagtttatcaagaacttgaggttgatctaatagctatg
aacatagaggagttcgaggatgaggaactgttcctaagcgccttgaaaactgccttgata
ttgaaggattgggctgatgaggttccggaagatgagatagctaagaagtattcggtttac
cctggagacgtgagggtcttcgcagataccgctgcttggttagttcacgcctattctgag
ctcgcctcgtttaagggaatgaagatccacgcggagtccttagccaagctcgagctcagg
atgaagtatggggttagggaggaactagtagagctggtttccataccctacataggaagg
tcgagggccaggaagctgtgggagagcgggataaggagcaaggatgacttgattcaagca
ggagagaggaggttggcctccatcttaggtcctaaggtagctaagagagtattgatggaa
atccaagggaagaaggaagttacgcttaggagctttttcgggtag
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