Ignicoccus pacificus: IPA_02525
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Entry
IPA_02525 CDS
T08506
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ipc
Ignicoccus pacificus
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipc03032
]
IPA_02525
03400 DNA repair and recombination proteins [BR:
ipc03400
]
IPA_02525
Enzymes [BR:
ipc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IPA_02525
DNA replication proteins [BR:
ipc03032
]
Prokaryotic type
DNA Topoisomerases
IPA_02525
DNA repair and recombination proteins [BR:
ipc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IPA_02525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
UXD21299
UniProt:
A0A977PKD2
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Position
complement(437371..439329)
Genome browser
AA seq
652 aa
AA seq
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MAGHILVIAEKPKAAEKIALALGKARKHKKYNVPYWEIVNGKRIIVAPAAGHLFGLASKS
PGFPIYEYEWRPLYEVEKGASYTKKFLALLASVSKGASLYINACDYDIEGSVIGFMIIKE
FGDLKRAKRMVFHALTPQELRKAWRNLRPLDWEMVEAGLARHELDWLWGINVSRALMRAY
KQATNKRRSLSAGRVQSPTLVKAVERELEIQTFVPIPYFTVSVKIKDTPFEPSLKFERRN
EAEAWKRNCKVGKVLDIIKRTEELSPPHPFNLPDLQAEAARLYGYSPAKTQSLAEDLYLD
ALISYPRTNSQKYPKDLDIKGILTSLSKSPYGGLVKALFKETKGIFKPNNGPKDDPAHPA
IYPTGKVPRGLDRDHQRIYDLIVRRFMATMASKARYEVQTVIVEISGEKFKAVGRKQVWK
GWSLYYPFSAPQEKEIPPFAKGEVVTPSCSLRQQYTKAPERFTKASLVKWMEKVGIGTEA
TRARIAETLFTRGYLKSVRGKVYATELGIAVSFVLANFFSELTSVELTRKFEQEMEMIRM
RKKKREEVVGEAKKVLKQLLALYMPHLEEAGKQLAFALGELEPPEKCPLCSRPRRGKYCE
LHERAEEELRKAYPEWKKRLGVSWKEYLEKMKKLKGAGELVRDVASLLSSEE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctggccacatactggtgatagcggagaagcccaaggctgcggagaagatagcccta
gccttggggaaagctaggaagcacaagaagtacaacgtcccgtactgggagatagtaaac
ggcaagaggataatagttgcccctgccgccggtcatctgttcggcttagcatccaagagc
cccggctttccgatctacgagtacgagtggaggcccctatacgaagtcgagaagggagct
tcctataccaagaagttcctcgctttgttggcttcagtatccaagggagcatccctttat
atcaacgcttgtgactacgacattgaaggctctgttataggtttcatgataatcaaagag
ttcggcgacttgaaaagagcaaagaggatggtgttccacgctctaacccctcaggagctg
aggaaggcgtggaggaacctaaggcccttggactgggagatggtggaggccggactggct
aggcacgagctcgactggctctggggaataaacgtctctagggccttgatgagggcctac
aagcaagcgaccaacaagaggaggagcctctccgctgggagggttcagagccccaccttg
gtaaaggccgtggagagggagctcgagatacagaccttcgttccaatcccttacttcacc
gtttcggtaaagataaaggatactccatttgagccttcccttaaattcgaaaggaggaac
gaggcggaggcgtggaagaggaattgtaaggtggggaaggtccttgatataataaagagg
accgaggagctgagccctccccaccccttcaacttgccggatctccaagctgaagcagct
agactctacggctattccccagccaagacgcagagcttggcggaggacctatacctagac
gccttgatatcctaccctaggaccaacagtcagaagtacccgaaggacttggacatcaag
ggaatacttacatccctctccaagagtccctacggaggattggttaaggcactcttcaag
gagacaaagggaatattcaagcccaacaacggtcccaaggacgacccggcacatccagcg
atctatcctactgggaaggtccccagaggattggatagggatcatcaaaggatctacgac
ctcatagtgaggagattcatggcaaccatggcttcaaaagcaaggtatgaggtgcagacg
gtgatagtcgagattagcggagagaagttcaaggccgtcgggaggaagcaagtctggaag
ggctggagcttgtactaccccttctcagctcctcaagagaaggagattcctccctttgca
aaaggagaggtggtaaccccctcatgctccttaaggcagcagtacaccaaggccccggag
aggtttaccaaagcgagtctggttaagtggatggaaaaggttgggataggtacagaggcg
actagggccaggatagcggagaccctcttcacgagggggtatctaaagagtgtcaggggg
aaggtatatgccactgagctagggatagcggtttcctttgtcctagccaacttcttctcc
gagttgactagcgtagagctgactaggaaattcgagcaagagatggaaatgataaggatg
aggaagaagaagagggaagaggtggttggagaggccaaaaaggtgctcaagcagctccta
gccctctacatgccccacttagaggaggccggtaagcaactggccttcgccttaggggag
ctggagcctccggagaagtgtcccctatgctctaggcccagaaggggcaagtactgtgag
cttcacgagagggcggaggaagagctgaggaaggcctatccggagtggaagaagaggttg
ggcgtgagctggaaggagtacttggaaaaaatgaaaaagcttaagggagcgggggagcta
gtcagagacgtcgcctctcttctttcttctgaagagtag
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