KEGG   Ignicoccus pacificus: IPA_03440
Entry
IPA_03440         CDS       T08506                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ipc  Ignicoccus pacificus
Brite
KEGG Orthology (KO) [BR:ipc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipc03400]
    IPA_03440
Enzymes [BR:ipc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IPA_03440
    5.6.2.6  RNA 3'-5' helicase
     IPA_03440
DNA repair and recombination proteins [BR:ipc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    IPA_03440
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 Transketolase_C nSTAND3 PhoH ThermoDBP-RP_arch
Other DBs
NCBI-ProteinID: UXD21363
UniProt: A0A977PJY7
LinkDB
Position
complement(606130..608754)
AA seq 874 aa
MSVKLFEPLPESDEVLGLLQPFVREWFTRKYSKLSPPQRGAIKLIKERKNVLISSPTGTG
KTLAAFLGILDDLLAKAVRGELEDKVYAVYVSPLRALGNDMRRNLVEPLNEIRQVMAEKG
IKEVQEVRVGIRTSDTSPSEKQRQLRKPPHILITTPESLAIALASTKFKERLKGVEYVIV
DEIHEMASSKRGTHLSLTLERLALWSGEFVRIGLSATIHPLEKVAKFLVGKDREAWIVDA
RFAKPVDIRVICPVKDIVNASAEELNKAIYEKLVELIKSHNSVIIFTNTRHSTEKVAFKL
KQLLEKEGLADKVETHHSSLSREVRLEVEEKLKKGELKVVVTSTSLEMGIDIGHVDLVVL
LSSPKSVSRLLQRVGRAGHRIDAVSKGRVIVVDRDDLMENTVLVKLALDRKIDRVRIPRN
ALDVLAQHLISLTIEHGEIPLDTAYEVTKRAYPYWNLSWEDFLSVVKYLAGEYGLEDEKV
YSKLYWDKEKNVLKRKRQARMIYMMNAGTIPDESKVKVYDAKTKQLLGHVEELFVQNLVP
GDVFVLSGRTYKFLYANGMRIYVEPAPSERPTVPAWFSEMLPLAYDSAREMAKFRESLPS
MSEKELIERYLLEPHAAKALKEYAEEQLRYVGIVPGDKTYLVEIWENIEDNTINYIFHYL
IGRRGIDALSRAYAYKLGELTGTNVSVTVTDYGFMLTVPRERAVDPMEVVRGVTPENLRT
LVEEAVKRTELFKRRFRHCAQRSFMILKRYMGREKSPERLQLSAQHLIKVVENIEGFPVY
KETLREILEDYMNIEAALETVKRIHEGGVEVRVVGPLDVPSPFAHVIVAKSFSDVVLMED
KRKLLQRLREMVLQRIGLRQELSSTDQKTGLSFG
NT seq 2625 nt   +upstreamnt  +downstreamnt
ttgtcagtgaagctcttcgagcctttgcccgagagcgatgaggttctgggtctgctccag
cccttcgtgagggagtggttcactagaaagtactccaagctgagccctcctcaaagggga
gcgataaagcttatcaaagagagaaagaacgtactcatctcctcgcctaccggaacaggg
aagactttggctgccttcttgggaattctagatgatcttctggcaaaggctgtaagaggg
gagctcgaggacaaggtatacgctgtctacgtctctcccttgagagcgttgggaaacgac
atgaggaggaacctggtagagccattaaatgagataaggcaagtgatggccgagaaggga
ataaaagaggttcaggaggtgagggtagggataaggactagcgatacctcgccctcggag
aagcagagacagttaaggaagcctccgcacatcctgatcaccaccccggagagcctggca
atagccttagcctcgacgaagttcaaggagaggctcaagggggtggagtacgttatagtg
gatgagatacacgagatggcatctagtaagagaggaacccacctctccttgaccttggag
aggttggccctctggtccggggagttcgtgaggatagggctctccgctaccattcatcct
ctcgagaaggtcgcgaagttcttggtggggaaggatagggaggcgtggatagtcgacgcc
agattcgccaaacccgttgatattagggtcatctgcccggttaaggacatagttaatgct
agcgctgaggaactcaataaagcgatctatgaaaagttggttgagttgataaagagtcac
aacagcgtaataatattcaccaatacaagacactccacggagaaggtagccttcaagcta
aagcagctcttggaaaaggaaggactggctgataaggtagagacccatcactcctcgctt
tccagggaagtgaggctggaggtcgaggagaagctgaagaagggagagttgaaggttgtg
gtgacctctacatcattggaaatgggaatagatataggacacgtggacttggtagtgctc
ctctcaagccctaagagcgtgagcagactcttgcagagggtagggagggccggtcatagg
atagatgccgtctcgaaggggagggtgatagtagttgatagggacgaccttatggaaaat
actgtcctcgtcaagttggcgttagataggaagatagacagagttaggatccctcggaac
gccttggacgtcttagctcagcacttgataagcttgacaatagagcacggcgaaattcca
ctggatacggcatacgaagtcaccaagagggcttatccctactggaacttgagctgggag
gacttcctctctgtcgtcaagtacttggctggggaatacggactcgaggacgagaaggtt
tactccaagctctactgggacaaggagaagaacgtgttaaagaggaagagacaagctaga
atgatatacatgatgaacgcgggcactataccggatgaaagcaaggttaaggtatacgac
gctaagaccaagcagctgctcggccacgtggaggagctcttcgtgcagaacttggttccc
ggagacgtgttcgtgttaagtggtaggacctacaagttcctctatgctaacggaatgagg
atctacgtggagccggctcctagcgaaaggccgactgtccccgcttggttcagcgagatg
cttcctttagcttacgactccgccagggagatggctaagttcagggaaagtctacctagt
atgagcgagaaggaactcatcgagaggtaccttctagaacctcatgcagccaaggcgctg
aaggagtacgctgaggaacagttaagatacgttggcattgtgcccggggacaagacctat
ctcgttgaaatttgggagaacatagaggacaacacaataaactacatcttccattaccta
atagggaggaggggcatcgacgccctctctagagcttatgcctacaagctgggagagctt
accggcaccaacgttagcgtcaccgtcaccgactacggcttcatgcttaccgttccaagg
gaaagagctgtagacccaatggaggtggtaaggggagttactccggagaaccttaggacc
ctcgtggaggaagcggtcaagaggacggagctgttcaagaggaggtttaggcactgtgct
cagaggtcattcatgatactgaagaggtacatgggaagggagaagagtcccgaaaggctt
cagctctcggcacagcatttgattaaggtggttgagaacatcgagggctttcccgtttac
aaggagacgctgagggaaatactggaggactatatgaacatagaggctgccttggaaacg
gtgaaaagaatacacgaagggggggtagaggtcagagtggtgggtcccctggacgtcccc
agcccgttcgcccacgtaatagttgccaagtccttcagtgacgtggtattaatggaggat
aagaggaagttattgcaaaggcttagggaaatggtacttcagagaatagggcttaggcaa
gaattaagctcgaccgatcagaaaaccgggttgagctttggataa

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