Ignicoccus pacificus: IPA_03780
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Entry
IPA_03780 CDS
T08506
Name
(GenBank) DNA-binding protein
KO
K15171
transcription elongation factor SPT4
Organism
ipc
Ignicoccus pacificus
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
IPA_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipc03021
]
IPA_03780
03019 Messenger RNA biogenesis [BR:
ipc03019
]
IPA_03780
Transcription machinery [BR:
ipc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
IPA_03780
RNA polymerase I system
IPA_03780
Messenger RNA biogenesis [BR:
ipc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
IPA_03780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
UPF0547
DZR
Zn_ribbon_15
Zn_Ribbon_1
DZR_2
zf-C4H2
zf-ChsH2
Zn_Ribbon_TF
A2L_zn_ribbon
HVO_0416
TackOD1
HypA
Zn_ribbon_3
Lar_restr_allev
DUF4931_N
NRDD
MTNAP1_ZnF
Motif
Other DBs
NCBI-ProteinID:
UXD21391
UniProt:
A0A977PJ86
LinkDB
All DBs
Position
653437..653652
Genome browser
AA seq
71 aa
AA seq
DB search
MKRMRKPFKACMDCRALVPRDAEVCPFCGSSNLTENWDGAIIVISEKSELLGELEYLKKP
GRYAVEVAASE
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggatgaggaaacccttcaaggcctgtatggattgcagggcgctggtccccagg
gacgcggaggtgtgtcccttttgcggaagcagcaatctaacggagaactgggatggagca
ataatagtgatatcggagaagtcagagctgctgggagagctggagtacttgaagaagccg
ggaaggtacgcggtagaagtggctgcatcggagtaa
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integrated database retrieval system