Ignicoccus pacificus: IPA_05965
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Entry
IPA_05965 CDS
T08506
Name
(GenBank) hypothetical protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ipc
Ignicoccus pacificus
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipc03400
]
IPA_05965
DNA repair and recombination proteins [BR:
ipc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IPA_05965
Archaeal homologous recombinant proteins
IPA_05965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
UXD22534
UniProt:
A0A977KBC3
LinkDB
All DBs
Position
1023951..1025066
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AA seq
371 aa
AA seq
DB search
MHLGKRQYGSYEREKDFYNAFNESVEIALREKVDAFVVSGDLFDTPVPYHGMEPIEVALR
GFRKLKEAGIEVIVIPGDHDAPKKVGKPSILFVREFGGAKVLVGEDAIRGIEVKGVKFYG
IPAFNPYRSSEREQVKKLMKILAKKADKKSVLVMHVGICDILPFSCIEMEELPKGFGYYA
MGHVHKSYHKYYSGSPLVYPGSLEVVSKDEIVDINNKGPVLVDASDDFSFQKIRIKVRPQ
FIVFVRGSGLKALSEVDKQIAQIPPRSVIHLEVSEEAKPFLEAIVRKVKEKRDPLILRIN
VITKKKKVDEPKKSVPKGVGILEALKEIYGEKLGERIYKLVEAGMVSKDEAYKELIELFE
SGLWSRARRAS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgcatctagggaagaggcagtacggctcctatgaaagggagaaggacttctataatgcc
ttcaacgaaagcgtggaaatagctttaagagaaaaggttgacgccttcgtcgtttcaggg
gatctctttgacactccagttccttatcacggaatggaacccatagaggtagcgctgaga
ggctttcggaaactcaaggaagcgggaatagaggtaatagtgataccgggcgaccacgat
gctccgaagaaggttggaaagccctccatacttttcgtaagggagttcggtggagcgaag
gttttggttggagaagacgcgataaggggaatagaagtaaagggggtcaagttctacgga
atcccggccttcaatccgtacaggagcagcgaaagggaacaagttaagaagctaatgaag
atattggcaaagaaagcggacaagaaatcggtattggtgatgcatgtagggatttgtgat
attctgcccttctcatgtatagaaatggaggaattacctaagggctttgggtattacgca
atgggacacgttcacaagagctatcacaagtactattccggttctcctctggtttatcca
ggatccttggaggtagtctcaaaagacgagatagttgatataaataacaaaggaccagtt
cttgtagacgctagcgacgacttcagcttccagaagataaggatcaaggtgaggccacag
ttcatagttttcgtgaggggtagcgggttaaaggccttaagcgaggttgacaagcagata
gctcagataccccctcgttcggtcatccacttggaagtaagtgaggaagccaagccattc
ctcgaggctattgttaggaaagtcaaggagaagagagatccattaatattgagaataaat
gtaataacgaagaaaaagaaagtagatgagccgaagaagagcgttccgaagggcgtcgga
atcttggaggccctcaaggagatatatggagagaagctgggcgagagaatatacaagcta
gtggaagccggcatggtttccaaggatgaggcctacaaggaactcattgagctatttgag
agcggactttggagtagagctcgacgtgcttcttag
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