KEGG   Ignicoccus pacificus: IPA_07040
Entry
IPA_07040         CDS       T08506                                 
Name
(GenBank) clamp loader protein
  KO
K04801  replication factor C small subunit
Organism
ipc  Ignicoccus pacificus
Pathway
ipc03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ipc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IPA_07040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ipc03032]
    IPA_07040
DNA replication proteins [BR:ipc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     IPA_07040
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid RuvB_N AAA_22 Rad17 AAA_3 AAA_assoc_2 AAA_18 DNAX_ATPase_lid AAA_14 AAA_16 AAA_5 nSTAND3 ATPase_2 AAA_2 ResIII AAA_28 PhoH AAA_11 bpMoxR Mg_chelatase Gp44_lid AAA_25 AAA_7 AAA_24 DUF815 IstB_IS21 TIP49 Viral_helicase1 AAA_30 SLFN-g3_helicase FtsK_SpoIIIE CbiA UBA_Rad5 DUF6437 KTI12 Lin1244_N RNA_helicase NPHP3_N AAA_33 TPR_7
Other DBs
NCBI-ProteinID: UXD21706
UniProt: A0A977PJI7
LinkDB
Position
1209591..1210571
AA seq 326 aa
MSSAYEMLWAEKYRPKTLDEIVDQEEIVARLKKFVEEKNVPHMLFAGPPGTGKTTAALAL
AHDLYGENYRQYLLELNASDERGIDVIRTKVKEFARSRTPPNVPFKIVLLDEADNMTADA
QQALRRLMELYSATTRFILIANFPSKIIEPIQSRCAYFRFKPLPKDKVVERLMYICKNEG
VQCEKEALEEIYELSEGDMRKAINILQAAAALGKVTVDAVYKAIGYAHPAEIREVITKAL
NGNFMEASKHLRKLMLEYGLSGVDVIKSIHKEIMSNNLKIDDRLRVLIADYAGEVQFRMT
EGADDEIQLQAFLAKLALLGPRFKSA
NT seq 981 nt   +upstreamnt  +downstreamnt
ttgagcagcgcgtacgagatgctgtgggcagaaaagtacaggccgaagaccctagacgag
atagtggatcaagaggaaatagttgccaggttgaagaaattcgttgaagagaagaacgtg
cctcacatgctcttcgccggtccccctggaaccggaaagaccaccgccgcccttgcccta
gctcatgacttatatggagagaattataggcaatacttgctcgagctcaacgcgagtgac
gagagaggaatagacgtaataaggactaaggtaaaggagttcgcaaggtctaggacgcct
ccaaacgttcctttcaagatagtcctcttagacgaggcggataacatgactgctgacgcc
caacaagccctcaggaggcttatggagctctactccgctaccactaggttcatcctaata
gctaacttccctagcaagatcatcgagcccatccagtccagatgcgcttacttccgcttc
aagcccttgcccaaggataaggtagtggagagactcatgtacatatgcaagaacgaggga
gttcagtgcgagaaggaggccttggaagagatatacgagctctctgaaggtgatatgagg
aaggccataaacatactccaagctgcagccgccctcgggaaggttaccgttgatgcggtc
tacaaggcgataggctacgctcatccagctgagataagggaggtcataactaaggccctt
aatggaaacttcatggaggctagcaagcacttgagaaagttaatgttggaatacggcctc
tccggagtcgacgtgataaagagtattcacaaggagataatgagtaataacctcaagata
gatgacagactaagggtgctcatcgctgactacgccggggaggtccagttcaggatgacc
gagggagcggacgacgagatccagctccaagcgttcctagccaagctcgccctcctcggc
cctcgctttaagtcagcctag

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