Ignicoccus pacificus: IPA_07670
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Entry
IPA_07670 CDS
T08506
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ipc
Ignicoccus pacificus
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipc03016
]
IPA_07670
Enzymes [BR:
ipc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IPA_07670
Transfer RNA biogenesis [BR:
ipc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IPA_07670
Prokaryotic type
IPA_07670
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
UXD21757
UniProt:
A0A977K9Y1
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All DBs
Position
1316701..1317759
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AA seq
352 aa
AA seq
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MKEALKWFEEMHGKCWFEGKWLIKQEMETDPRYGKYPWERDVNELLELGVINLDKPPGPT
SHEVVAWIKKMFNLEKAGHGGTLDPKVTGVLPVALAEATKVIHYVMLSGKEYVMVIQFHD
AVKEQDVIENLKYLVGEIYQRPPLRSSVKRQLRTKKVYYIHLIEFYPERRMALVRVGSES
GTYMRKIAHDLGLLLGTGAHMRELRRTRSGPFHEEYNLVRMQELSEAKFLWDHLKDDSLL
KKYIMPCEYAVCHMQKIMVGDGAVDAIAHGAHVAAPGVAALTDGIKKGDVVAIVSLKGEL
VAIAQALASSKEIMEMEKGWVAKTKRVIMKRGVYPSVWKKEKEMKRSSGSEG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaggctctgaagtggttcgaggagatgcacggaaagtgctggttcgaagggaaa
tggctaataaagcaagagatggagaccgaccctaggtacggcaagtatccttgggagagg
gacgtcaacgagctcttggagctgggagtaataaacttggataagcccccgggacctacc
tcccacgaggtagttgcttggatcaagaagatgttcaacttggaaaaggcgggtcacgga
ggaacattggaccccaaggtaaccggcgttctccctgttgccttagcggaagctaccaag
gtaatccactacgtcatgctttccggaaaggaatacgtaatggtaattcagttccacgac
gccgttaaggagcaggacgttatagagaacctcaaatacctagtaggagagatctaccag
aggcctcctctcaggagcagcgtgaagaggcagttgaggaccaagaaggtgtattacatc
catttaatagaattctatcctgaaagaagaatggctctagtaagggtaggatctgaaagc
ggaacttacatgaggaagatcgcacatgatctaggattgctcttgggcaccggcgcgcac
atgagggagctgaggaggaccagaagcggtcccttccacgaggagtacaacctagtcagg
atgcaagagctgagcgaggccaagttcctctgggatcacttgaaggacgatagcttactg
aagaagtacataatgccttgcgaatatgctgtctgccacatgcagaagataatggtaggc
gatggggcagttgatgctatagctcatggagcccacgtagctgctcccggagttgcagct
ctaactgatggaataaagaagggagacgtggttgcgatagtaagcttgaagggagagctg
gtggcaatagctcaagccctagctagctccaaggagataatggaaatggagaagggatgg
gtcgctaagaccaagagggtaattatgaaaaggggagtgtatccgagcgtttggaagaaa
gagaaggagatgaagagatcaagcggctccgaggggtga
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