Ignicoccus pacificus: IPA_08630
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Entry
IPA_08630 CDS
T08506
Name
(GenBank) mRNA surveillance protein Pelota
KO
K06965
protein pelota
Organism
ipc
Ignicoccus pacificus
Pathway
ipc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
IPA_08630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipc03019
]
IPA_08630
Messenger RNA biogenesis [BR:
ipc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
IPA_08630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
DUF1464
Motif
Other DBs
NCBI-ProteinID:
UXD21831
UniProt:
A0A977KA59
LinkDB
All DBs
Position
complement(1478898..1479953)
Genome browser
AA seq
351 aa
AA seq
DB search
MKMRVLEVNESKGEVRLRIEDEEDLWDFYTILREGDMLRAKTVRSISAGSSKEKVPMILT
IKVTGAEFQPFTNVIRVKGIVVEGPERFGLKGSHHAIKVYPGRELVLIRENGVEDLVKKI
ESLSKKKPKIAVLAVDYDDYSLAIVRGQGIEWVFEGSMRIPGKADENRERIASQRVTELV
KNVESELKKRDVKQIVVVGPGFFKEKVAEELRKRGLEVKVDSASSGDRAGVLEALRRGSL
ASLAKELESLKALEVLEEVIKHIAKDDNLAVYGLDDCLFAAKANAVDTLLISDYLLHHPE
EEVRRKAVELVETVEKMGGKAIIVPRDTEAGERLKALGDVVAMLRFPLEVG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgagggtcttagaggtaaacgagagtaagggtgaggtgcggctgagaatagag
gacgaggaggacctatgggacttctacacaatattgagagaaggggatatgctaagagct
aagaccgttagaagcatatcggctggctcctctaaggaaaaggttcccatgatcttgacg
ataaaggtaactggagcggagttccaacccttcaccaacgtaataagggtgaagggaata
gtagttgaaggacctgaaaggttcggtttgaaggggtctcaccatgcgataaaggtctac
cccggtagagagcttgtacttattagagaaaatggagtagaagacttggtaaagaagata
gagagtttaagcaagaagaagcctaagatagcggtgttagcggtagattacgatgattat
agcttagccatagtcaggggacaagggatagagtgggtcttcgagggaagtatgaggata
cccggtaaggcggacgaaaacagggagagaatagcgtctcagagggtaaccgagttggta
aagaacgttgagagtgagctgaagaagagggatgtgaagcagatagtcgtggtaggtcca
gggttcttcaaggaaaaggtggctgaggaactgaggaaaagaggtctcgaggttaaggta
gacagcgcctcgagcggcgatagggctggagtgctagaggccttgaggaggggttcctta
gcatccttagctaaggagctcgaaagcttgaaggcgctcgaggtgttggaagaagtaata
aagcatatagctaaggacgataacttggcggtctatggactggacgactgcctgttcgcc
gcgaaggctaacgcagtcgatacgttactcatttcagattacttgctccatcacccagag
gaggaagttaggaggaaggcggtcgagctggttgagacggtcgagaagatgggaggtaag
gcgataatcgttccgagggacaccgaggctggggagaggctcaaagcgttaggagacgtg
gtcgcgatgttgaggttcccgcttgaggtagggtaa
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