Ignicoccus pacificus: IPA_08650
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Entry
IPA_08650 CDS
T08506
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
ipc
Ignicoccus pacificus
Pathway
ipc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IPA_08650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipc03021
]
IPA_08650
Enzymes [BR:
ipc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IPA_08650
Transcription machinery [BR:
ipc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
IPA_08650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DUF1490
Motif
Other DBs
NCBI-ProteinID:
UXD21834
UniProt:
A0A977KA29
LinkDB
All DBs
Position
1482762..1485434
Genome browser
AA seq
890 aa
AA seq
DB search
MQRFRLKSQRIDKIIKEIQFGILSPEEIRKMAVVAIVSDRAYDEAGLPIEGGIMDPRLGA
IGPGQKCPTCGNTMHNCPGHFGYIELAKPVIHYVFVPYIHDALRATCRVCGKVKLPEDEI
ESYLDLYEKLEKKWPLHAKRVIAYVKKKAAKVQQCPHCGAKQYKIRLEKPYKFLEERQTM
VVQLTPADVRQRLEMIPDKHARVLGFDVKNARPEWMVLTVLPVPPISVRPSIILESGTRS
EDDLTHKIADIVRINNKLRENIESGASEAMIESLWDLLQYHVATFFDNEIPGIPPAKHRS
GKPLRTLAQRLKGKEGRFRANLSGKRVDFSARTVISPDPNISINEVGVPVEVAKILTVPV
RVTPWNIEEMRQLVINGPDKWPGANYIITPQGMRIDLKFGKDRKKIAESIQPGYIIERHL
QDGDIVLFNRQPSLHRMSIMAHKVKVLPGRTFRLNPLVCPPYNADFDGDEMNLHVPQSEE
ARAEAKELMLVEKHILSPRYGGPIIGGLQDYISGAYLMTTIATLLTDKDVAELVGVTGYD
GELPEPAFLSPKKRWTGKQLFSIFLPKDFNYSGKANIATGELKCDDEYCFHDSFVVVRNG
ELVQGVLDKKSIGHEQPKSLMHWIVYEYGPSKGREIYDTAFKMFLRYIEKRGFTTRYDDV
RLPEEAKKEIQQVIEEAYKEVEKLIEDYKNGLLEPLPGRTLEETLELMIMDVLAKARDKA
GEIAAKHLSPLNNAVIMARAGARGNILNLTQMAALLGQQSVRGERIKRGYRKRTLPHFKW
GDISPDARGFVKHSFYEGLSPTEVFFHAAGGREGLVDTAVRTSQSGYMQRRLINALQDLR
VDYDGTVRGMKGALHQNVYGDDGVDPMRSVHGKSVDVDHVIEKITRVRLE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgatttcgactcaagtctcaacgcattgataagataattaaggaaatacagttc
ggcatactttcgcctgaagagataaggaagatggccgtagtggcgatcgtcagcgacaga
gcctacgacgaagcgggattgccgatagaaggaggaataatggatccccgtctcggagcg
ataggtcccggtcagaagtgtcccacttgtggaaataccatgcacaattgccccggtcac
ttcggttacatcgagctcgccaagcccgtaatccactacgtgttcgtgccctacatccac
gacgctctaagggccacttgtagggtttgtggaaaggtaaagctccccgaagatgaaata
gagagttatttggacttatatgagaaattggagaagaagtggccgttgcacgctaagagg
gtaatagcttacgtcaagaagaaggcagccaaggttcaacagtgcccccactgtggagcc
aagcagtacaagatcagattggagaagccctacaagttcttggaagagaggcagaccatg
gtggtgcaactaaccccagctgacgttagacagaggttggagatgattccagataagcac
gcgagggtccttggattcgacgtcaagaacgctaggccggaatggatggtcctaacggtc
ctcccggtgcctccgatctccgtgagaccctccattatactcgagagcggtactaggtct
gaggacgacctaacccacaagatagcagacatagttaggataaacaacaagctgagggag
aacatagagagcggtgcatccgaggcgatgatagagagcttgtgggacttacttcagtac
cacgtggccaccttcttcgataacgagatacccggaatacctccggccaagcacagatcc
gggaagcctcttaggaccttggcacagaggctcaagggtaaggagggtaggttcagagcg
aacctatccggtaagagagtggacttctccgcgagaactgtaatctccccagatcccaac
atatccatcaacgaggtaggagtgcccgtcgaggtagccaagatcctaacggtcccggta
agggtgaccccttggaacatcgaggagatgagacagctcgtaatcaacggccccgataag
tggcctggagcgaactacatcataactcctcaaggaatgaggattgaccttaagttcgga
aaggataggaagaagatagcggagagcatccagcccggctacatcatcgagaggcactta
caagacggagacatagtcctcttcaacagacagccctcgcttcacagaatgagcatcatg
gcccacaaggtgaaggttctacctggaaggaccttcaggctcaaccccttggtatgtcct
ccctacaacgcagacttcgatggagacgagatgaacttgcacgtccctcagagtgaggag
gctagagcggaagcgaaggagctaatgctcgtggagaagcacatcttaagcccgagatac
ggaggacccataatcggaggtctgcaagactacatctctggcgcttacctaatgaccacc
atagctaccctcctcaccgacaaggacgtggccgagctggtaggagttaccggttacgac
ggagagctccccgagcccgccttcctaagtcctaagaagaggtggactggaaagcagctc
ttctccatattcttacccaaggacttcaactactctggaaaggcgaacatagctacggga
gagctgaagtgtgacgacgagtactgcttccacgactccttcgtggtagtgaggaacgga
gagctggtacaaggagttctggacaagaagtccataggtcacgagcagcccaagagcctc
atgcactggatagtctacgagtacggacctagcaagggaagggagatctatgacactgcc
ttcaagatgttcctaaggtacatcgagaagagaggattcaccaccaggtacgacgacgtg
aggcttccggaggaggccaagaaggagatacagcaagtcatcgaagaggcctacaaggaa
gtagagaagctaatcgaggactacaagaacggcttgctggagcccttgcccggaaggacc
ttagaggagaccttagagctcatgataatggacgttctagccaaggcgagagacaaagcc
ggagagatagcagccaagcacctaagcccgttgaacaacgcggtcataatggcaagggcc
ggagcgaggggtaacatactcaacttgactcagatggctgccttgctaggccagcaatcg
gtcagaggagagagaatcaagagaggatatcgtaagagaacgttaccccacttcaagtgg
ggtgacataagccctgacgcgagaggattcgtgaagcactccttctacgaaggattgagt
cccactgaggtgttcttccacgcggccggtggtagagagggtctggtggatacagcggta
aggaccagccagtccggatacatgcagaggaggctcatcaacgccctccaagacttgagg
gtggactacgacggaacggtgaggggaatgaagggagcgctacaccagaacgtatatgga
gacgacggagtagacccgatgaggagcgtgcacggtaagtccgtggacgtggatcacgta
attgagaagataaccagggtgaggctagaatga
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