Ignicoccus pacificus: IPA_08655
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Entry
IPA_08655 CDS
T08506
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
ipc
Ignicoccus pacificus
Pathway
ipc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IPA_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipc03021
]
IPA_08655
Enzymes [BR:
ipc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IPA_08655
Transcription machinery [BR:
ipc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
IPA_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
UXD21835
UniProt:
A0A977KA30
LinkDB
All DBs
Position
1485464..1486702
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AA seq
412 aa
AA seq
DB search
MVDEYEKALREDFRVKCKPTFLTELKEKLHKLLEVRPETTEEEIRRIIDLSVKYYLRALV
EPGEAVGTVAAQSIGEPSTQMTLRTFHYAGVKEFNVTLGLPRLIEIVDARKTPSTPMMTI
YLEEEYRHDKEKALEVARKIEMTKVENVASTVEIDWYESAIIIRLDPEMLEDKGVTRDDV
IRVINKSRIKGKAEPDPEDEYTVIVRLDADAYAGIGEIQKIKDKILGLRIKGIKDIKRVI
VQQREGEFVLVTDGSNLSQVLNVEGVDPTRTITNNIKEIEEVLGIEAAREAIIREVLDVL
ENQGLDVDRRHITLLADTMTWSGEVRQVGRHGIAGTKPSVLARAAFEVTVKQLAEAAVAG
EVDELSGVTENIIVGQPIPLGTGMVTLLMNPQALAKKSVKTEPQRVAGGEQS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
ttggttgacgagtacgagaaggctctcagagaggactttagggtaaagtgcaagccgacg
ttcctgacggagctcaaagagaagttacacaagctgttagaggtaagaccagagacaacc
gaggaggagataaggaggatcatcgatctgagcgtgaagtactacttgagagcattggtc
gagccaggagaagcggtaggaacggtagcggcacagtccataggagagccttcaacacaa
atgaccctgagaaccttccactacgcgggagtcaaggagtttaacgtaactctaggtctt
ccgaggctcatagagatagtggacgccaggaagacccctagcactccaatgatgaccatc
tatttggaggaagagtacagacacgacaaggagaaggccctagaagtagcgaggaagata
gagatgactaaagtagagaacgtggcctcaactgtcgagattgattggtacgaaagcgca
attataataaggctggatccggagatgctcgaggacaagggagtaacgagagacgatgta
attagggtaataaacaaatctaggataaagggtaaggccgagcccgaccccgaggacgag
tatacggtaatagtcagattggacgcagacgcctacgccggaataggtgagatccaaaag
ataaaggacaagatactcggattgagaataaagggaataaaggacataaagagggtcata
gtacaacaaagagaaggcgagttcgtcctcgtaaccgacggatccaacctctcccaagtc
ctaaacgtcgaaggcgtagacccaacgagaacgataacaaacaacatcaaggagatagag
gaggttctaggaatagaagccgctagagaagcaataataagggaagtgttggatgtgctc
gagaaccaaggtcttgacgtcgacagaaggcacatcaccttgctggcagacactatgaca
tggagcggagaggtaagacaagtgggaagacacggaatagccggcactaagccgagcgtt
ctagctagagcggcgttcgaggtaacggtaaagcagctggcagaggccgccgtggccgga
gaggtggacgagctcagcggcgttaccgagaacataatagtaggacagcccatacctctc
ggaaccggaatggtaaccttactaatgaacccgcaagctcttgccaagaaatcggttaaa
acggagcctcaaagggtggctgggggtgagcagagctga
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