Ignicoccus pacificus: IPA_09465
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Entry
IPA_09465 CDS
T08506
Name
(GenBank) RNA-associated protein
KO
K14574
ribosome maturation protein SDO1
Organism
ipc
Ignicoccus pacificus
Pathway
ipc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IPA_09465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipc03009
]
IPA_09465
Ribosome biogenesis [BR:
ipc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
IPA_09465
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GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Motif
Other DBs
NCBI-ProteinID:
UXD21912
UniProt:
A0A977KA76
LinkDB
All DBs
Position
complement(1623251..1623952)
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AA seq
233 aa
AA seq
DB search
MKRKKDHVIARLEIKGHRFEILVDPDKALELRSGKNIPIEEVLITDTVYKDVGSGDRVSP
ELLKKTFGTTDINKIAKEIIMKGELQLTAEQRRRILEAKKRQVINFIARNAIDPQTKLPI
PPARIEAAMKEAKVSVDPYKDIEEQALKIVKAISRVIPIKIARMIIEVRIPPQFSGRAYS
SLQKLGELKSVDWKSDGSLVAEIEIPAGMQQEVIDKLNKLTKGNVEVKVVYTG
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaggaagaaggatcacgtgatagcacgtttggagataaagggtcatcgatttgag
atcttggttgatcccgataaagccttggagcttagaagtggaaagaacataccaatcgaa
gaagtcttgatcactgatacggtatacaaagatgtcggctcgggtgatagagtatccccc
gagcttttgaagaagacattcggtacaacagatataaataaaatagcaaaggagattata
atgaaaggtgaacttcaactaacggctgagcagaggaggaggatactggaggccaagaaa
agacaagtgataaacttcattgcgagaaatgccatagatccccaaactaagttgccaata
cctccggcgaggatcgaggcagctatgaaggaagcgaaggtatcagtagatccttataag
gacatagaggaacaggccctaaaaatagtaaaggccatatctagggttatacctataaaa
atagcgcgcatgatcattgaagtcagaatacctccacaattctccgggagggcatactcg
agccttcagaagctaggagagttgaagtcggtcgattggaagagtgatggcagcttggtg
gcggaaatagagataccggcaggaatgcaacaagaggttatcgataaattgaacaaactc
actaagggcaacgtagaggtaaaggtggtgtatacaggatga
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