Idiomarina piscisalsi: CEW91_00375
Help
Entry
CEW91_00375 CDS
T04931
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ipi
Idiomarina piscisalsi
Pathway
ipi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW91_00375 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipi03019
]
CEW91_00375 (recQ)
03400 DNA repair and recombination proteins [BR:
ipi03400
]
CEW91_00375 (recQ)
Enzymes [BR:
ipi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEW91_00375 (recQ)
Messenger RNA biogenesis [BR:
ipi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEW91_00375 (recQ)
DNA repair and recombination proteins [BR:
ipi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEW91_00375 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ASG66870
LinkDB
All DBs
Position
79074..80927
Genome browser
AA seq
617 aa
AA seq
DB search
MSSTAVSTAEQLAHDPLQSKLESVFGYHEFREGQRGIMDAALDGRDSLVLMPTGGGKSLC
YQLPAICSEGVAVVISPLLSLMQDQVEALNALDINAATLHSGVSAEQSMNTLQALQRGDI
KLLYVSPERILQPSFIERLQTLNLSFIAVDEAHCISQWGHDFRPEYGQLGVLRSYLPNTP
FMALTATADSATQHDIIERLHLNAPLVHRSSFDRPNIRYVVQEKYKPLKQVKDYVKKQKG
VAGIIYCGSRKKTEELAESLQQSGVRAAPYHAGLEHTLKETTLRQFLRDDIDVVVATVAF
GMGINKPNIRFVVHFDIPRSVESYYQETGRAGRDGLPAEAMMLYDPRDAQWIRRMIDEQD
NEQRRAVEAQKFSAMQAMAEAQTCRRLVVLNYFNEYSDKECGNCDLCLDPPTRYDALEDA
QKALSCVYRVGQQFGINHVVEVLRGSKAQRVLELGHDTLTTYGLGKAKPQEHWFSVLRQL
IHRGLIIQDIRRFAALQLTEAARPVLKGEVPLELAKPRLELTATKTRITDRGDYNKILFR
RLRKLRKDIADKEQVAPFVVFSDAALVEMCVHYPTTAADMLDINGVGEVKLARYGQEFMS
AIEAFLAGASERQLFNG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaccgcagtcagcactgccgaacaactggcgcacgatccgcttcagtcgaag
cttgaatcagtctttggttaccatgagtttcgtgagggccaaaggggcattatggacgcg
gctctggacggacgtgactcactggtgctcatgccgacaggcggtggtaagtcattatgt
taccagctgccggcaatatgcagcgaaggtgtggctgtggttatttcgccgctgttgtcg
ctcatgcaagatcaagtggaagcactgaatgcgcttgatataaacgccgccaccttgcac
tcaggtgtatcagctgaacagtcaatgaacacgttgcaggcattacagcgcggcgacatt
aaactgctgtacgttagccctgagcgtattttgcagccgagttttattgaacgcttacaa
acgctgaatctgtcgtttatcgctgttgatgaagcgcattgtattagccagtgggggcat
gacttcagacctgagtatgggcagctgggtgtgttgcgcagctatttgccgaacacacct
tttatggccttaacggccaccgcggactcagccacccagcatgacattattgaacggctg
catttgaatgcgccattagtgcaccgcagctcatttgaccgccccaatattcgttatgtg
gttcaggaaaagtataaaccgctaaaacaggttaaagactacgtcaaaaaacaaaaaggc
gtggccggtatcatttattgtggtagccgcaagaaaaccgaagaactggcggaaagcttg
cagcagtccggcgttcgggcggcgccttatcatgcgggactggagcatacgctcaaggaa
acgactctgcggcagtttctgcgtgacgatattgatgttgtggtggccacggtggcgttt
ggtatgggtatcaataagccgaacatccgttttgtcgtgcattttgatattccgcgtagc
gtcgagtcgtactatcaggaaaccgggcgagccggacgggacggtctgccagcggaagcg
atgatgctttacgatccgcgagacgcacagtggatacgccggatgatagacgagcaagat
aatgagcagcgtcgggccgtggaagcgcagaagttctcagccatgcaggccatggcggaa
gcgcaaacctgtcgccgcctagtcgtattgaactactttaatgagtactccgataaagag
tgcggaaactgtgatttgtgtttggatccaccaacccggtacgacgctctggaagacgcc
caaaaagcgcttagttgtgtttaccgtgtggggcaacagtttggtattaaccatgtggtt
gaagtattgcgaggctccaaagctcagcgagtccttgagcttggtcatgacacattgacc
acctacgggctcggtaaggcaaaaccacaggagcattggttttcggtattgcgccaactg
attcaccgggggctgattattcaggatattcgtcggtttgcggccttacagctgaccgag
gcggcgcgcccggtgttaaaaggtgaagtgccgttagagttagccaaaccaaggctcgag
cttactgcaactaaaacccgaattaccgaccgtggggactataataaaatactcttccgg
cgtttgcggaaacttcgtaaagacattgcggacaaagaacaagtggcaccttttgtggtg
ttcagtgacgcagcattggtggaaatgtgtgttcattatccgacaaccgccgccgacatg
ttggatatcaatggtgttggtgaagtgaaactggctcgttatggtcaggaatttatgagc
gctattgaagcgtttttagccggagcaagtgagcggcagttatttaatggttga
DBGET
integrated database retrieval system
