Idiomarina piscisalsi: CEW91_00465
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Entry
CEW91_00465 CDS
T04931
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ipi
Idiomarina piscisalsi
Pathway
ipi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEW91_00465 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipi03400
]
CEW91_00465 (recB)
Enzymes [BR:
ipi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CEW91_00465 (recB)
DNA repair and recombination proteins [BR:
ipi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEW91_00465 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_12
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ASG64717
UniProt:
A0ABM6LQD0
LinkDB
All DBs
Position
100424..104113
Genome browser
AA seq
1229 aa
AA seq
DB search
MSQSSTHILENPLDFPLNSSRLIEASAGTGKTYTIAALYVRLVIGHGTQDTAFERELVPK
NILVMTFTKAATEELSDRIRARLAEAAAYFRDPDSVDSDPFLASLREDCVAKEQNLKHLA
RLLDLASQSMDEAAVKTIHGWCQSMLKEHAFASGSLFSQDVETDNEELRLQAAEDYFRRF
IYPADAELSEKLLEDFTSPEALLGLTYSLSKSGQAPVEGDLQTLLIEAERGHKQRIAAIK
QEVAPIFNELIDKASQAKGTATKLKQFQKFANWCTVAELVEPDVTAANWKNISADELQTF
AEAKLGGMPDSWSVLGQLQERIKQSKVQQTQELAKVKQHAAFWVNKRFAELQNQRAEMGH
DDMLTRLRDALKGPGGEALAAAIRKQYPIAMVDEFQDTDPVQYEIFNRIYNLAEPHPGTG
IFLIGDPKQAIYSFRNADIYTYLKARRDTAGRHYNLAKNFRSSQSMVDSVNALFERAEEL
PHGAFLFKSKDDNQLPFNRVAANGLKRTFKHCLLSSYLKTAPALLWSVSNEEKRNKATLF
KAAANHHANLIASLLNDPQAGYYNADNVLEQRVKTSDIAVLVNNFSEANAIKKALSDRGL
KSVYLSDRESVFAQRVAKDLLALVSACAEPRDPSLIRSALATRLLGLPFAELEHIHSNEQ
AWEARVEQFLSYHDQWLRQGVLAMLHNVLHDHQVPATLLEDRIYGERQLSDVLHIAELLQ
QQSLVLDGIPALVNHFAEQVNERHGFGSNSRTQSDEQQLRLESDDELIKIITIHKSKGLQ
YPLVFMPFVAYTQAETHRIKPPAVYHDENGELQVLWSKDDDNKQRLSDEILAEDLRKMYV
AVTRAQYATFIALEATSEHRNNPLFYLLNGGEALSDELYNVVNERWQQSAHTQVTRLEDD
EPLVRALEQEQQTPKLTPKKMPAGRKLERWWVASYSALKYEGAVTKNTQAPQSPDEMNLL
DEREDEDEQVASVAEPSADSIHHLPKGAGPGTFLHNLLEESANQGFEVIAHDATERTELV
QRFCVSPFWQEHEQSIERWLNAYLQTEFVLNADGETVSLGQLQQYKAEPEFWFGASVVNA
QTLDNLVQQHTLPGYGRPSLEPNLLNGMLKGFIDLVFEHNGKYYVADYKSNWLGEDDHAY
SEEAMREKILHSRYDLQYVIYTLALHRLLKARLGDEYDYDTHIGGAVYLFLRGHRAETAG
AFCDRPSRELIEQLDALFAGESATDKESV
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatcgtcaacgcatattttggagaatccgctcgactttccgctgaacagcagt
cgcctgattgaagcgagcgccggcaccggtaaaacctacaccattgcagcgctttatgtg
cggttagtgataggtcacggcacgcaggacacagcctttgagcgagagcttgtgcccaaa
aatattctggtcatgacctttactaaagcggcgacagaagagttgagtgaccgcattcgt
gcgcgcttagccgaagcggccgcctactttcgtgacccggactcggtcgacagtgacccg
ttcttagccagtttgcgggaagactgcgtagcgaaagagcagaacttaaaacacttagcg
cgattactggatttagcgtcgcagtcgatggacgaagccgcggttaaaaccattcacggc
tggtgtcagtccatgttgaaagaacatgcctttgccagcggcagtttgtttagtcaggac
gtcgaaaccgataatgaggagctgcgtttgcaggcagccgaggactattttcgtcgcttt
atctacccggccgatgccgagttgagtgaaaagttgctggaagactttacctcgcctgaa
gccctattaggtttgacgtacagtttaagcaaaagcgggcaggcaccggttgagggagat
ttgcaaacgctattaattgaggcggagcgtggccataagcaacgaattgcggcgataaag
caagaagttgcgcctattttcaatgaattgattgataaggcgtcacaagccaaaggcact
gccaccaaacttaagcaatttcagaaatttgcaaattggtgcacagtcgcagagttggtt
gagccggatgtcacagcagcaaactggaaaaatatcagcgcagatgagttacaaaccttt
gctgaggccaaattgggcggtatgccggacagttggagcgtcttagggcagctgcaagaa
cgcattaagcaaagcaaagtccaacaaacgcaagaactggctaaagtaaaacagcacgct
gcattttgggtgaataaacgctttgctgaattgcaaaatcagcgcgccgaaatggggcat
gacgacatgcttacgcgcttgcgcgatgcgttaaaaggtcctggcggtgaagcgttggcg
gcggctattcgtaagcagtaccccatcgccatggtagacgagtttcaggatactgacccc
gttcagtatgaaatattcaaccgcatctacaatttggcagaaccgcatccaggcaccgga
attttcctgattggtgacccaaagcaggccatatacagcttccgaaatgccgacatctat
acctacttaaaagctcggcgagacaccgcaggtcgtcactataacctggcgaaaaacttc
cgttcgtcgcagtctatggtggacagtgttaatgctctatttgagcgtgcagaggagcta
ccgcacggcgcctttttgttcaaatccaaagacgacaaccaactgccctttaaccgtgtg
gctgccaacggactgaagcgtacgttcaagcattgcttgttatcgagctatttaaaaacc
gcgccggcgttactttggtcggtatcaaacgaagaaaaacgcaataaagccaccttattt
aaagcggcggcgaaccatcatgccaacctaatagcgtcgctgctgaatgacccgcaagcc
ggttattacaacgcagacaatgtgcttgagcagcgtgttaaaacgagcgacattgcggta
ctggtgaataacttcagcgaagcgaatgccattaaaaaagcactgagtgaccgcggcctt
aaaagcgtttatttatcggatcgcgagtcggtatttgcacagcgcgtggctaaagactta
ttggcactggttagcgcttgtgcggagccgcgtgatccttcacttattcgtagtgccctg
gcaacgcggctgttagggctgccgtttgcagaattagagcatattcacagtaacgaacaa
gcgtgggaagcacgtgtcgagcagtttttaagttatcacgaccagtggttgcgccagggc
gtattggcgatgttgcacaatgtattgcacgaccatcaggtacccgcgaccttgttggaa
gaccgtatttatggcgaacgccagctatcagacgtgcttcatattgctgaattactgcaa
cagcagagcctcgttttagatggtattccggcgttggtgaatcattttgcggagcaggtg
aatgagcgtcacggctttggtagcaacagccgcactcaaagtgacgagcagcagctacgc
ctggaaagtgacgatgaactgataaaaattatcaccattcataagtccaaagggttgcag
tatccgctggtatttatgccttttgtggcttatacccaggcagagactcaccgcataaag
ccgccggcggtatatcacgatgaaaacggtgagttgcaagtgctttggtctaaagacgac
gacaataaacagcgtttaagcgacgaaattctcgcagaggatttacgcaaaatgtacgtc
gcagtgactcgtgcacagtatgccaccttcattgcgctagaggccaccagtgagcaccgt
aataatccgctgttttacttgttgaacggcggtgaagctttgtctgacgagctttacaat
gttgtaaatgagcgctggcagcagagcgcgcatacgcaggtgacacgcctggaagatgat
gagcccctggtccgtgcgctagagcaggagcagcagacgcctaaattgacgcctaaaaag
atgccggcaggccgaaaactcgaacgttggtgggtggctagctacagcgcgctgaagtat
gaaggcgcggtgacgaaaaacacacaggcaccgcagtcgcccgacgaaatgaacctgctg
gatgagcgagaagacgaggacgagcaagtcgccagtgtcgcagagccgagtgcggacagc
attcaccatttacccaaaggcgccgggccgggcacctttttgcataacttactggaagag
tcggcgaatcagggctttgaagtaatcgctcacgacgccaccgagcgcactgagctggta
cagcgtttttgtgtcagccctttttggcaggagcatgagcagagtattgagcgttggtta
aatgcctacttgcagacagagtttgtgcttaatgcggacggcgagactgtcagtctgggt
cagttgcagcaatacaaagcggagcccgagttttggtttggtgccagtgtcgttaacgca
caaacgctcgataacctagtgcaacaacacacattaccgggttacgggcgcccctcgcta
gagcctaacttgctgaacggcatgctaaaaggttttatcgacttggtctttgagcataac
ggtaaatattatgtggccgactacaagtcgaactggctgggtgaagacgaccacgcctac
agcgaggaggccatgcgcgagaaaatactgcacagccgttatgatcttcaatacgtgatt
tatacgctggcactgcaccgcttgctaaaagcacggcttggcgatgaatacgattacgac
acccacatcggtggtgcggtttatctctttttacgggggcacagagccgaaaccgcaggc
gccttttgtgacaggccatcccgtgaattgatagagcagctggatgcgttatttgccgga
gaaagcgcgacagacaaggagtcagtatga
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