Idiomarina piscisalsi: CEW91_01275
Help
Entry
CEW91_01275 CDS
T04931
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ipi
Idiomarina piscisalsi
Pathway
ipi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW91_01275 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipi03021
]
CEW91_01275 (rho)
03019 Messenger RNA biogenesis [BR:
ipi03019
]
CEW91_01275 (rho)
Transcription machinery [BR:
ipi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CEW91_01275 (rho)
Messenger RNA biogenesis [BR:
ipi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEW91_01275 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
AAA_22
AAA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ASG64872
UniProt:
A0A241R130
LinkDB
All DBs
Position
271770..273038
Genome browser
AA seq
422 aa
AA seq
DB search
MNLTELKDKPVNELVELADSMGLENMARLRKQDIIFAILKAHAKSGEDIYGGGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIGGKIRPPKDSERYFALLKIREVN
FDKPENSRNKILFENLTPLHADERFRLERGNGSTEDITARVLDLSAPIGKGQRGLIVAPP
KAGKTLLLQNVATSIAANHPEAELIVLLIDERPEEVTEMHRLVQGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALHKPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLNRKLAEKRVFPAIDF
NRSGTRREELLTSQDELQKMWILRKIMNPMGEVEAMEFLIDRLQMTKTNDEFFESMKRQR
NS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaactgaacttaaagataaacccgtaaacgagcttgttgagctcgcggactca
atgggccttgagaatatggcccgtctgcgtaagcaggacatcatttttgctattttaaaa
gcccacgcgaaaagcggtgaagacatatacggcggcggtgtgttggaaatattgcaggac
ggcttcggcttcttgcgatcggccgattcgtcatatttggccggtccggatgacatttat
gtatcgcctagccaaattcgtcgctttaacttgcgcacaggtgatacgattggcggtaaa
attcgaccgccgaaagacagcgaacgttattttgccctcctgaaaattcgcgaagtcaac
tttgacaaacctgaaaactcccgtaataaaattctctttgaaaacctgacaccattgcac
gcagatgaacgttttcgtttagagcgcggtaatggcagtacggaagatattacggcgcgc
gttctcgacttgtcggccccgattggtaaaggccagcgtggtcttattgtggcgccaccg
aaagcgggtaagacgctattactgcaaaacgttgcaacgtctattgcggcgaatcatccg
gaagcagagcttattgtactgcttatcgatgagcgtccggaagaagtaacggaaatgcac
cgtttggtacagggtgaagtggttgcttcaaccttcgatgagccagccagtcgccacgta
caggtcgcggaaatggttatcgagaaagcgaagcgtttggttgagcacaaaaaagatgtt
gtcatcttattggattcaattactcgtttggcgcgcgcttataacaccgttattccaagc
tcaggtaaagtcctgacaggtggtgtggacgctaacgcgctgcataaaccaaaacgtttc
tttggtgccgcacgtaacgttgaagaaggcggcagcttaaccattattgcgacagcgctt
atcgacaccggctcaaagatggatgaagttatctacgaagagtttaaaggtaccggtaac
atggaattgcacttgaaccgtaagttggcagagaagcgagttttccctgcaatcgacttt
aaccgttcaggtacacgtcgtgaagaattgctgacgtctcaggacgagcttcagaaaatg
tggatcctgcggaagattatgaacccaatgggcgaagttgaagccatggagtttttgatt
gaccgtttgcaaatgactaagaccaacgacgaattcttcgaatcgatgaagcgtcaacgc
aacagctaa
DBGET
integrated database retrieval system
