Idiomarina piscisalsi: CEW91_03615
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Entry
CEW91_03615 CDS
T04931
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ipi
Idiomarina piscisalsi
Pathway
ipi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEW91_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipi03021
]
CEW91_03615
03400 DNA repair and recombination proteins [BR:
ipi03400
]
CEW91_03615
Enzymes [BR:
ipi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEW91_03615
Transcription machinery [BR:
ipi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEW91_03615
DNA repair and recombination proteins [BR:
ipi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEW91_03615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
ASG65295
LinkDB
All DBs
Position
754255..755244
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISPTHAKVTLEPLERGFGYTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDVIEILLNLKGLAVSVEGKDEATLTLNKSGAGPVTAGDFTHDGD
VEIVNPEHVICHLTGDYELNMRVKVERGRGYVPAASRQSADDDERPIGRLLVDASFSPVE
RIAYSVDAARVEQRTDLDKLVIEMETNGTLDPEEAIRRSATILAEQLDAFVELRDISEPE
QKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLIEND
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttaccgaattcctaaagccgaggttagtcgacatcgagcaaattagc
ccgactcatgccaaggttacactggagcctctggaacgcggctttggttatacactgggt
aatgcgttacgtcgcattttactatcgtcaatgccaggttgcgcagtgactgaagttgaa
atcgacggcgtgctgcatgaatacagcagtaaagagggtgttcaagaagatgtcatcgaa
attttgttgaacctgaaggggctggctgtcagcgttgaaggtaaagacgaagctacgttg
accttgaataaatccggagcaggtcctgtaacagcaggcgatttcactcacgatggtgat
gtagaaattgttaatccagagcacgttatttgtcacttaaccggtgactatgagcttaac
atgcgtgttaaggtcgagcgtggtcgcggatacgttcctgcggcatcacgtcagtcagct
gacgatgatgagcgtccaatcggtcgtctattagtagacgcttcgttcagcccagtagag
cgcatcgcatattctgttgacgcagctcgggttgaacagcgtactgacttagacaagctg
gttatcgaaatggaaaccaatggtacgttggatccagaagaagcgattagacgttctgcc
acaattttagcagagcagctagacgctttcgttgaacttcgagacatcagcgagccggaa
caaaaagaagagaagccggagtttgatccgattcttcttcgtccggtcgacgacttggaa
ttgactgttcggtctgcgaactgcttgaaggcagaagcgattcagtacattggtgactta
gtacaacgtaccgaggttgagttgttgaaaacacctaacctaggtaaaaagtcgttaact
gagattaaagatgtgttggcatcacgtggcttgtctctgggtatgcgcctggagaattgg
ccaccagctagcttaattgagaacgactaa
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