Idiomarina piscisalsi: CEW91_04105
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Entry
CEW91_04105 CDS
T04931
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ipi
Idiomarina piscisalsi
Pathway
ipi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CEW91_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipi03400
]
CEW91_04105
DNA repair and recombination proteins [BR:
ipi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEW91_04105
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEW91_04105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
Ish1
Microtub_bd
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ASG65376
UniProt:
A0ABN5ARG4
LinkDB
All DBs
Position
846791..848824
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AA seq
677 aa
AA seq
DB search
MAKSFQLVSKYKPAGDQPKAIDSLLDNLDAGLAHQVLLGVTGSGKTFTMANVIERSQRPT
LILAHNKTLAAQLYGEMKEYFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALMERRDVVLVASVSAIYGLGDPESYMKMMLHLRRGDIIDQRDILRRLAQLQ
YKRNDAAFERGTYRVRGEVIDIFPAESEEMAVRVELFDNEVDRISFFEPLTGQVTEKDVA
RATIYPKTHYVTPREVLVKAIDKIKDELKERRDILLKQNKLIEEQRINQRTQFDIEMMLE
LGYCSGIENYSRYLSGRAPGEPPPTLMDYLPDDALLIIDESHVTVSQVGAMYKGDRSRKE
NLVEYGFRLPSALDNRPLKFDEFEAIAPQTIYVSATPGKYELERSSNEVVEQVVRPTGLV
DPTIEVRPVATQVDDLMSEIRLRTEQGERVLATTLTKKMAEDLSDYLDEHGIKVRYLHSD
IDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTI
GRAARNVNGKAILYGDRITGSMQRAIDETERRREKQIAFNKEHGITPKGLNKKITDVMDL
GQGSASARKSKADKALAEVASGYDARTVVIKDTKSLLKEIENKEKQMYQAAQDLEFEKAG
QLRDDIAQLREQLKRAV
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtcatttcagttggtttctaaatataaaccagccggcgaccagccgaaagcc
attgatagtttgctcgacaacctggatgcaggcttagctcatcaagtcttactgggggtt
actggctcgggaaaaaccttcactatggcgaatgtcattgagcgttcgcagcggcccaca
ttgatactggcgcacaataaaaccctagcagctcagctttatggtgagatgaaagaatac
ttcccgaacaacgcagtggagtacttcgtttcttactatgattactatcaaccagaagct
tacgtcccaacgaccgatacctttattgaaaaagatgcctccattaatgaccatatagaa
caaatgcgcttgtcggcgactaaagcgttgatggaacgccgggatgttgtcctggtggcg
tcagtgtcggccatttatggtttgggtgaccctgagtcatacatgaaaatgatgctgcat
ttgcgtcgcggcgacattattgaccagcgcgatattttgcgtcgtttagctcagctccag
tacaagcgaaatgatgccgcttttgagcgtggtacgtatcgcgttcgtggtgaagtgatt
gacatttttccggccgaatcggaagaaatggcggtacgtgttgagttgtttgacaacgaa
gttgacagaatcagcttcttcgagccattgaccgggcaagtcacagagaaggacgtcgcc
cgtgcaaccatttaccccaaaacacactatgtaacgccgcgtgaagtgcttgtcaaagcg
attgataagattaaagacgaactgaaagagcgtcgtgatatattactgaagcaaaataag
ctgatagaagagcaacgtattaatcaacgaactcagtttgatattgaaatgatgctagag
ctcggctactgctcgggcattgaaaactactcccgttacttgtctggacgcgcgccgggc
gagccgcccccgacattgatggattacctaccggacgatgccttacttattattgatgag
tctcacgtaacagtgtcgcaagttggcgctatgtacaaaggggaccgctcacgtaaagaa
aacctggtggaatacgggttccgtttaccgtctgcgttggataaccgtccgttaaaattt
gatgagtttgaagcgatagcaccgcaaactatctatgtttcagcaacgcctggtaagtac
gaactcgaacgaagcagtaacgaggtggttgagcaggtcgttagaccgacagggctggtc
gatccaacgattgaagtacggccggtagcgacgcaggttgatgacttgatgtcagagata
cgtttacgcacagagcagggtgaacgcgtattagcaaccacattgaccaagaaaatggcg
gaagatttatccgattatttggatgagcacggtattaaagttcgctacttgcactcggat
attgatactgtcgaacgtatggaaattattcgcgatttacggttaggcgagttcgatgtt
ctggtcggaattaacttgttgcgtgaaggtttggatatgccggaagtgtcgctggtggct
attcttgatgctgataaagaaggtttcttacgttcagatcgttctctgattcagacgata
ggccgagcggcgcgtaacgtgaatggtaaagcgattttgtacggtgaccgcattaccggc
tcaatgcagcgggcgattgatgaaaccgagcgccgccgtgaaaagcagattgcgtttaac
aaagagcatggcatcacgccgaaggggttgaataagaaaattaccgatgtcatggatttg
gggcagggcagtgcgtctgctcgtaagagtaaagcggacaaagctctggcggaggtcgcg
tcaggctatgatgcccgcaccgttgttattaaagacacaaaatcgttattaaaagaaatt
gagaacaaagagaagcaaatgtatcaagccgcgcaggatctcgagtttgagaaagccggg
cagttgcgagatgacattgcacagttgcgagaacagctaaaacgcgccgtataa
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