Idiomarina piscisalsi: CEW91_08110
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Entry
CEW91_08110 CDS
T04931
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ipi
Idiomarina piscisalsi
Pathway
ipi03030
DNA replication
ipi03430
Mismatch repair
ipi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEW91_08110 (holA)
03430 Mismatch repair
CEW91_08110 (holA)
03440 Homologous recombination
CEW91_08110 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipi03032
]
CEW91_08110 (holA)
03400 DNA repair and recombination proteins [BR:
ipi03400
]
CEW91_08110 (holA)
Enzymes [BR:
ipi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEW91_08110 (holA)
DNA replication proteins [BR:
ipi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEW91_08110 (holA)
DNA repair and recombination proteins [BR:
ipi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEW91_08110 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ASG66110
LinkDB
All DBs
Position
1662385..1663464
Genome browser
AA seq
359 aa
AA seq
DB search
MQTLFPEQLSQYIERSGVPPVLLLFGDDLLLRMDAIDVIRQHFGHDAEKYHWIQSKDFEW
KQLSELEQSMSLFGSDTLIELELPENKPGKEGSNALHSYANQLPENHTLVVIGSYLKKEH
QNSRWFKSLAEHGPLIRTQSPDKARLPVFIHKRAQKYQLTLAEGVPELLSDWFEGNLLAL
DQELRKWQLLSDSGVITHEFLTDASSDSSRFNVFALQESIQAGNYKDALHKLTRLLDEEN
DFHRFVWILQREIQLLTTLKSHAGNTDVSALFRRNMIWSNQQPGYIKRAESLSVETLHQL
HYLIERLEMALKQDSGESPLVLTVHLLGLLCQKESSLTAAHSLQPFSQPLQLENTFISL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacattgttcccagaacaattaagtcaatacattgagcgttcaggcgttccccct
gtgttattgctgtttggcgatgacttgttattgcggatggatgccatagacgttatccgg
caacatttcggccacgacgcagaaaaatatcattggatacagtcaaaggactttgaatgg
aagcaactgagtgaactcgaacaatcaatgagtttattcggaagcgacacacttattgaa
ctcgagcttccggaaaacaaacccggaaaagaaggttcaaacgctttacacagttacgca
aatcaactgcctgaaaaccatacactggttgtcattggaagctacttaaaaaaggagcac
cagaatagccgttggtttaagtcgctagctgaacacggccctcttattcgaacccaaagt
cccgataaggctcgtttgccggtgtttattcataagcgtgcccaaaagtaccaactgacg
ctagccgaaggcgtacctgaattactgtctgactggtttgaaggcaacttgttagcgctt
gatcaagaactgcgtaaatggcaattactcagtgattccggcgttattacacacgagttc
ctaaccgatgcgagcagtgactcaagccgctttaatgtgtttgcgctgcaagaaagtatt
caggctggtaactataaagacgctctgcacaaactgactcgtttactcgatgaggaaaac
gattttcatcgctttgtctggatcttacaacgggaaattcaattgctgacaacgctgaaa
agtcacgctggcaacacagacgtttcagctctttttcgtcgtaatatgatttggtcaaat
caacaaccaggttatattaaacgagctgagtctttatcagtagaaacactgcaccaactg
cactacctcattgagcgtttagaaatggcattaaaacaggacagtggtgagtcgccatta
gtacttactgttcacttgcttggactgctgtgtcagaaggaaagcagcttaacggctgct
catagtttgcagccgttctctcaaccattgcagcttgaaaatacgtttatttcattatga
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