Idiomarina piscisalsi: CEW91_08195
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Entry
CEW91_08195 CDS
T04931
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ipi
Idiomarina piscisalsi
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipi03016
]
CEW91_08195
Enzymes [BR:
ipi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CEW91_08195
Transfer RNA biogenesis [BR:
ipi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CEW91_08195
Prokaryotic type
CEW91_08195
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ASG66125
UniProt:
A0ABN5AS21
LinkDB
All DBs
Position
complement(1678147..1679109)
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AA seq
320 aa
AA seq
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MGKARPRKGRPVCGVVFLDKPKGMSSNHALQRVKRLYNAQKAGHTGALDPLATGLLPVCL
GEATKFSQYLLDADKSYRVEATLGVRTTTSDAEGEVVERKAVNISEDDIRRKLSEFIGQQ
QQTPSIYSALKHEGRPLYYYARRGIDVPQKVREITIHSIEFIQLVGEVLELQVSCSKGTY
IRTLIDDLGQALGCGAHVSLLHRNGVADLNADNMLAIEQLEQLAEAGDLDAQLHSVDCLL
HALPEQKVTRSEARDLLHGQPVDNCLDREVAVGDQCRMWSERIDGGKEFIGVGALRDDNR
FWPKRVLALEFCEFSLDDLK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagctcgtccccgtaaagggcgtcctgtctgtggcgtagtctttctggataaa
ccgaagggcatgagttccaatcatgcccttcaacgtgttaagcgcctctacaatgctcag
aaggccggccataccggcgctctggatcctttagcaaccggcttattgcccgtgtgttta
ggggaagccactaaattttctcaatacctgcttgatgcggataaaagctatcgggttgaa
gccactttgggtgtgcgaacaacgacgagtgacgcagagggcgaggtagtagagcgtaag
gcggtcaatatttccgaagacgatattcggagaaagctgtcggagtttattgggcagcaa
caacaaactccgtctatctattccgcgcttaagcacgaaggccgaccattgtattattac
gctcgccgcggtattgacgtcccacaaaaagtgcgtgagataaccatccactccattgag
tttattcagttagttggtgaggttcttgagttacaggtcagctgcagcaaagggacttat
atacgcacattaatcgatgacctgggtcaggcattagggtgcggagcgcatgtttcgtta
ctgcatagaaatggtgtggcggatttaaatgcggacaatatgttggctatagagcagctg
gagcaattggctgaagcgggcgatctggacgcacagctccattcggttgattgtctgcta
catgccttaccagagcaaaaagtcactcgttctgaagcaagagatttacttcatgggcag
ccggtagataattgcttagatcgtgaggttgccgttggcgatcaatgccgtatgtggagt
gaacgtattgacggaggaaaagagtttattggtgtcggtgctttaagagatgataaccgc
ttttggccaaagcgcgtgttagcgcttgaattctgcgagttctctctcgatgatttgaaa
taa
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