Idiomarina piscisalsi: CEW91_08445
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Entry
CEW91_08445 CDS
T04931
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ipi
Idiomarina piscisalsi
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipi03032
]
CEW91_08445 (topA)
03400 DNA repair and recombination proteins [BR:
ipi03400
]
CEW91_08445 (topA)
Enzymes [BR:
ipi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CEW91_08445 (topA)
DNA replication proteins [BR:
ipi03032
]
Prokaryotic type
DNA Topoisomerases
CEW91_08445 (topA)
DNA repair and recombination proteins [BR:
ipi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CEW91_08445 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_2
Toprim_4
Zn_ribbon_TFIIB
DUF7351
DUF2399
Motif
Other DBs
NCBI-ProteinID:
ASG66169
LinkDB
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Position
complement(1735579..1738194)
Genome browser
AA seq
871 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGKDFVVKSSVGHVRDLPTRATETVKSKPAAEVRKMSPEA
KAKYQKERDYKRLIARMGIDPENNWEAHYEVLQGKEKVVKELKQLAKKSDKIILATDLDR
EGEAIAWHLRELIGGEDDRFKRVVFNEITKNAIQEAFKHPAQLNTDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWDVYADLASTANDTL
RMQVVKESGKNFRPVNEEETNKALSLLKGADYEITSREDKPTSSKPSAPFITSTLQQAAS
TRLSFGVKKTMMLAQRLYEAGHITYMRTDSTNLSSEAVSACRDLIENEFGKKYLPESANR
YGAKSNAQEAHEAIRPSDVKIKASSLSSMDRDAQRLYELIWRQFVACQMTPAKYDSTTLI
ATAGDFELKARGRVMRFPGWTKVMPPSSKKDGDTNLPDLKKGDSLSLEQLEPEQHFTKPP
ARYSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVESRRFFAEKMGEIVNDRLIENF
TELMNYNFTAEMEQALDDIAAGKRQWKETLDSFYDDFKQRLEKAELDPAEGGMRENSVVM
TDIDCPECGRKMGIRTASTGVFLGCSGYNLPPKERCTKTINLTPGEEAIEVTDEDERETE
ALRAKKRCPKCGTAMDSYLIDEKRKLHVCGNNPTCDGQLLEQGKFRIKGYDGPTIECDKC
GSEMQLKNGRFGKYFGCTNSECKNTRKLLRNGEPAPPKEDPVPLPELPCEDSDAYFVLRD
GASGIFLSANTFPKSRETRAVTVKELARFKDRLPKKFLYLADAPQEDEDGNDAIVRFSRK
NKEQYVVTEVNKKQTGWKAFYRDGKWTVDAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcgctcgtcattgtcgagtctccggcaaaagccaaaaccattaataagtac
ttaggtaaggactttgtggttaagtccagtgttggtcacgtgcgtgatctgccaacacgt
gcgactgaaacggtaaaaagtaagccggcagcagaagttcgcaaaatgtcgcctgaagct
aaagcgaagtatcaaaaggagcgtgactataaacgcttaatcgctcgtatggggattgat
cctgaaaacaactgggaagctcattacgaagtacttcagggaaaagagaaagtcgttaaa
gagctcaaacagctggcgaaaaagtcagataaaattattctcgcaacggatttggaccgc
gaaggggaggcaatagcctggcacctgcgggaattaattggtggcgaggacgaccgcttt
aagcgtgtggtatttaacgaaattaccaaaaacgccattcaggaagcgtttaaacatcct
gctcagttaaacactgaccgtgttaatgctcagcaaacgcgacgctttttagatcgtgtg
gtaggttttatggtgtcgccactcttgtggaaaaaagttgcaagaggtttgtctgccgga
cgtgtacagtcagtcgctgtacgcctggtagttgagagagagcgcgaaattaaagcgttt
gtaccggaagaatactgggatgtttatgcggacttggccagcacggcgaacgacacgctt
cgcatgcaggtggtgaaagagtcaggtaagaacttccgcccagtcaatgaagaagaaaca
aataaagcattaagtttactgaaaggcgcagactacgagataacttctcgtgaagataag
ccgacttccagcaagccgagtgcgcctttcattacctcgactctgcaacaggcggctagt
actcgcttaagttttggtgttaagaaaacaatgatgcttgcacagcgtctttatgaggct
ggacacatcacttatatgcgtaccgactcaacgaatttgagttctgaagcggttagcgcc
tgtcgtgatctcattgaaaatgaattcggtaaaaagtacttaccggagtcggcgaatcgt
tatggcgcaaaaagtaatgctcaggaagcacacgaggcgatacgcccatccgatgtaaaa
ataaaagcgtcttcactgtcgtcaatggatagggacgcacagcgtctgtacgagctcatt
tggcgccagttcgttgcgtgtcaaatgacaccggcgaaatacgatagcacgactttaatc
gcgaccgccggcgactttgaactgaaggcgcgcggtcgagtaatgcgttttccgggctgg
acgaaagtcatgcctccgtcgtcgaaaaaagacggcgataccaacttaccagacttaaag
aaaggcgactctctgtcacttgaacagttagaacctgagcagcattttactaagccgccg
gctcgctacagtgaagcttccttggtcaaagaactagagaagcgcggtattggtcgacca
tcgacgtatgcgtcgattatttcgaccattcaggatcgtggctatgtgcgtgttgaaagc
cgtcgtttctttgccgagaagatgggagaaatcgtcaatgatcggctgattgaaaatttc
accgagttaatgaattacaactttacggctgagatggaacaggcgcttgatgacattgct
gcgggaaaacgccaatggaaagagacactggacagtttctatgatgacttcaaacagcgc
cttgaaaaagcggagttggatccggctgaaggtggtatgcgtgaaaacagcgttgtcatg
accgatattgactgccccgaatgtggtcgcaaaatgggcatccgtacggcatcaactggt
gtgttccttggttgttccggatataacctgccgccgaaagaacgttgtactaagacaata
aacctgacacccggcgaagaagcgatagaagttaccgacgaagacgagcgtgaaacggaa
gccttacgcgccaagaaacgctgtccgaaatgcggtacagcaatggacagctatttaatt
gacgaaaaacgtaagttgcatgtgtgtggtaacaacccaacgtgtgatggccagttgctc
gagcagggtaagttcagaattaaaggttatgacggcccgacaattgagtgtgacaagtgc
ggttctgaaatgcagttgaaaaacgggcgttttggtaagtatttcggttgtaccaatagt
gagtgcaagaacacacgtaaattacttcgaaacggtgagcctgcgccaccaaaagaggat
ccagtgccgttaccggaattgccgtgtgaggattcggacgcctactttgtgctgcgcgac
ggcgcttcgggtatctttttatcagcaaatacgtttccgaaatctcgagaaacgcgagcg
gttacggtaaaagagctggcccgttttaaagatcgtctaccgaagaagtttctgtacctg
gctgacgccccacaggaagacgaggacggtaacgacgctattgtccgattctcgcggaaa
aataaagaacagtacgtggtaacagaagtgaataaaaaacaaacaggttggaaagccttt
taccgtgacggtaaatggactgttgacgctaagtag
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