Idiomarina piscisalsi: CEW91_08480
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Entry
CEW91_08480 CDS
T04931
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ipi
Idiomarina piscisalsi
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipi03016
]
CEW91_08480
Enzymes [BR:
ipi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CEW91_08480
Transfer RNA biogenesis [BR:
ipi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CEW91_08480
Prokaryotic type
CEW91_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF6103
Motif
Other DBs
NCBI-ProteinID:
ASG66175
LinkDB
All DBs
Position
complement(1744818..1745600)
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AA seq
260 aa
AA seq
DB search
MRIALGLEYDGSQYYGWQRQREVISVQQHLEDALSKVANETVEVTCAGRTDAGVHATAQV
VHFDVKSERKNAAWTLGVNSNLPDGIAVRWAKPVAEDFNARFSATARRYRYIIANTRLRP
GIHAAGVSHYHQPLNERLMHEAAQSLIGEHDFTSFRAAQCQSHSANRNVTRLEVTRKGDF
VIVDISANAFLHHMVRNIVGSLIVIGQEQQPTSWLKELLELKDRTQAAATAKPGGLYLVA
VTYPESWGIPTVTPGPLWLE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatagctttggggctggaatacgacggcagccagtactatggctggcaacgacag
cgcgaagtcattagtgtccagcagcatttagaagacgcattaagcaaagttgctaatgaa
accgtggaagtcacttgcgccggtcgaaccgacgcgggcgttcatgcaactgcgcaggtt
gtgcactttgacgtaaaaagcgagcgaaaaaacgccgcctggacgctaggcgtcaatagt
aacttaccggatggaatagccgttcgttgggcaaaacccgttgccgaagactttaacgcc
cgtttcagtgcaactgccagacgctatcgctatattattgcgaacacgcgcttgcgcccg
ggcatacacgcagcaggggtcagtcattaccaccaaccgttgaacgaacgcttaatgcat
gaagccgctcaatcgttaatcggagagcacgactttacttcctttcgggccgctcagtgc
cagtcccattcggccaatcgcaacgtcacgcgactggaagtaacacgtaaaggcgacttt
gtcatcgttgatattagtgccaatgcgttccttcatcacatggtgcgtaatattgttggt
agccttattgttataggccaggagcaacagccaaccagctggttaaaagaattactcgaa
ctaaaagaccgcacacaggcggcagcaaccgctaaaccgggcggtttgtacttggtggct
gtgacgtatccagagagctggggtattccaaccgtcacaccaggaccgctttggttagag
tga
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