Idiomarina piscisalsi: CEW91_09485
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Entry
CEW91_09485 CDS
T04931
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ipi
Idiomarina piscisalsi
Pathway
ipi02020
Two-component system
ipi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ipi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CEW91_09485
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CEW91_09485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ipi02022
]
CEW91_09485
02035 Bacterial motility proteins [BR:
ipi02035
]
CEW91_09485
Two-component system [BR:
ipi02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
CEW91_09485
Bacterial motility proteins [BR:
ipi02035
]
Flagellar system
Flagellar assembly proteins
Others
CEW91_09485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA_2
AAA
Mg_chelatase
AAA_3
HTH_30
AAA_18
HTH_28
MCM
nSTAND3
AAA_19
AAA_7
AAA_30
MerR
TIP49
AAA_22
HTH_11
HTH_20
VpsR
Motif
Other DBs
NCBI-ProteinID:
ASG66954
LinkDB
All DBs
Position
complement(1959427..1960830)
Genome browser
AA seq
467 aa
AA seq
DB search
MTTARTVLVVEDDVSLREAIIDTLELADCQCLEAANGEEALVALKETKVSLVISDVQMPG
VDGLQLLRSMNRQQYDIPVIMMTAFAKVDDAVIAMREGAVDYLTKPFSIEKLQTLVQRYL
PDGAIDDVSPVAEEAASQQVFAMAKRVADSDASVMITGPSGTGKEVLARYIHKHSGRAQA
PFVAINCAAIPENMLESMLFGYEKGAFTGATQSQPGKFELAQGGTILLDEITEMPLHLQA
KLLRVLQEKQVERLGSRKTIQLDVRILATSNRDLQQAVAQGAFREDLMYRLNVFPLHWLS
LAERPADILPLAENLLHRHKQRSGIKTPVSFSEQAKLRLTEYHWPGNVRELENVVQRALV
LHRNEVIEPDDLMLQLNQQSSAPVSNETVFPEQVSHSEKSNEEQTVRATDTADKLDDSLF
HQEYRIIKDALQRHQGKRKPVADELGISPRTLRYKLAKIREQGLSIN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgcgcgcacggtactggtggttgaagacgatgtttcattgcgtgaagcaatc
atcgacacgcttgagcttgccgattgccaatgtttggaagccgcaaatggtgaagaggca
ctggttgcactgaaagagacgaaagtatctctggtgattagtgacgtacaaatgcctggc
gttgatggcttacaattgctacgtagcatgaaccggcagcagtacgatattccggtcatc
atgatgacggcattcgcgaaagtggatgatgcggttattgctatgcgagaaggagccgtc
gattatttgacgaagccattttccatcgaaaagctgcaaacgcttgtgcaacgttattta
ccggacggcgcgattgatgatgtcagtccggtggctgaagaagcagcgagtcagcaagta
tttgcaatggcaaagcgagtggctgacagtgacgccagcgtgatgattaccggaccgagc
ggcaccggtaaagaagtgctggcgcgttatatccataaacactcaggcagagcgcaagcg
ccgttcgtggcaataaactgtgcagcaatacctgaaaacatgctggaatcaatgttgttc
ggctacgaaaaaggtgcatttaccggcgctacgcagtctcaaccgggtaagtttgaatta
gcgcagggcggcacaattttattggatgaaatcaccgaaatgccgctgcatttgcaggcg
aagctattgcgggttttgcaggagaagcaggtagagcgcttaggctctcggaaaaccatt
cagttagatgtccgaattcttgcaacctcaaaccgagatttacagcaggctgtggcacaa
ggggcgttccgtgaagatttaatgtatcgactgaacgtatttcctctgcattggttatct
ttggccgagcgacctgccgatattctgccgctggcagaaaacctgttgcatcgacacaag
cagcgttcgggtataaaaacgccggtgtcctttagtgagcaggcaaaactccgcttaact
gaatatcactggccaggtaacgttcgggaattggaaaacgttgtacagcgggctttggtc
ttgcaccgaaacgaagtgattgaacccgacgatttgatgttgcagttgaaccaacagtcg
agcgcacccgtgagtaatgagactgtctttcctgagcaagtcagtcactctgaaaaaagt
aatgaagagcagactgtgcgtgctaccgacacagcggataagctggatgattcattgttc
catcaagagtaccgaattatcaaagacgcgcttcagcgtcatcagggcaaacgcaaaccc
gtggctgatgaactgggcattagtccacgcacattacgctataaattagcgaagatccgc
gaacagggcctctccataaattaa
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