Ilyobacter polytropus: Ilyop_0188
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Entry
Ilyop_0188 CDS
T01337
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
ipo
Ilyobacter polytropus
Brite
KEGG Orthology (KO) [BR:
ipo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ilyop_0188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipo03021
]
Ilyop_0188
Transcription machinery [BR:
ipo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ilyop_0188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
ADO81977
UniProt:
E3H881
LinkDB
All DBs
Position
214020..215246
Genome browser
AA seq
408 aa
AA seq
DB search
MKDFIRNEKARALIRKSIEEKVITFEEVNEALQDDFPVDKIEFLINGMIDQGIKIIRREE
LEKVKSEDKDGKTSVKAATPKVAVKVDEKLDSEQVETNKKVKKVEGDFNPAEIEEVTEEE
LSPEKLMTISSGVDVDEPIKMYLREIGQVPLLTHKQEIEHAKNSAEGDEWATQQLVEANL
RLVVSIAKKHTNRGLKLLDLIQEGNIGLMKAVEKFEYTKGYKFSTYATWWIRQAITRAIA
DQGRTIRIPVHMIETINKIKKESRIYLQETGKDATPEVLAERLGMESEKIKAILEMNQDP
ISLETPVGSEEDSELGDFVEDNKMLSPYEQTNRNLLKEQLDDVLQSLSEREEKVLRFRYG
LDDGCPRTLEEVGKIFKVTRERIRQIEVKALRKLRHPSRRKKLEDFKM
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactttattaggaatgagaaggcgcgtgctttgataagaaagtcaatagaggag
aaagttataacttttgaggaagtaaatgaagcgctacaagatgattttccagttgataaa
atagaattccttataaacggaatgatagatcagggtataaaaatcatcaggagagaggaa
cttgaaaaagtaaagtctgaagataaggatggaaaaacctctgtgaaagctgctactcct
aaagttgcagtaaaagtagacgagaaactggattcagaacaagtagagacaaataaaaaa
gtaaaaaaagtagagggagattttaaccctgcggaaatagaagaagtaactgaggaagag
ttatctccagaaaagcttatgacaataagttccggagtagatgtagacgaacctattaag
atgtatctaagggagatcggacaggtaccattacttactcataagcaggagatcgagcat
gcaaagaattctgccgaaggtgatgaatgggcaacccaacagttggtagaagccaacttg
agacttgttgtaagtatagcaaaaaagcacacaaacaggggactgaaattgttagacctt
attcaagagggaaacataggattgatgaaggctgttgaaaaatttgaatataccaaagga
tataaattctcgacttatgcaacttggtggataagacaagctataactagagcgatagcg
gatcaaggaagaactataagaataccggtgcatatgatagagacgataaacaagataaaa
aaggaaagcagaatataccttcaggagacaggaaaagatgcaacaccagaggttcttgct
gaaagattgggaatggaatctgaaaaaataaaggctatacttgagatgaatcaagatccg
atatccttagaaactccagttggaagtgaggaagatagtgagttaggtgactttgtagaa
gataacaaaatgctcagcccttacgagcaaacaaatagaaatcttttgaaagaacaacta
gacgatgtacttcagagtttaagtgagagagaggaaaaagtcttaagatttagatatggt
ttagatgacggatgtcctagaacacttgaggaagtcggtaaaatatttaaagttactaga
gaaagaatcagacagatagaggtaaaggctcttaggaaactaagacacccaagcagaaga
aaaaaattggaagattttaaaatgtaa
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