Ilyobacter polytropus: Ilyop_0189
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Entry
Ilyop_0189 CDS
T01337
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03086
RNA polymerase primary sigma factor
Organism
ipo
Ilyobacter polytropus
Brite
KEGG Orthology (KO) [BR:
ipo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ilyop_0189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipo03021
]
Ilyop_0189
Transcription machinery [BR:
ipo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ilyop_0189
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
GerE
HTH_16
Motif
Other DBs
NCBI-ProteinID:
ADO81978
UniProt:
E3H882
LinkDB
All DBs
Position
215338..216327
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AA seq
329 aa
AA seq
DB search
MSLNIKKLKKKIKEKVLLQKDFEEFVCQECSEEKDFQDLIDLIFKENIEIQENEENYEDN
IGDGYYSEEILEQYFHDISLYTPIPKEKEKDIVKKAQDGDEEAREMLVTSNLKLVAKIAM
KYSKSGVNYIDLIQDGTIGLIAAIDKYDLSKGHSFTSYSVWWIKREIINSIANRINAIKI
PSYVYLMNKKIRIFEDDFMERNNKKPSYQEISEALNLSLEEVEKMKEASEIGVGGFADGN
EPDLGDFNTVDQIDKELNLLEERSKISNLMRKISPEEQKVVEMYYGLDDNKRLGFKEISK
IMGVSVEKVKFLKERAILKLKCANERMWG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaatataaaaaaattaaagaaaaaaattaaagaaaaggtacttcttcagaag
gattttgaagagtttgtatgccaagagtgcagcgaagagaaggattttcaggaccttatt
gaccttatttttaaagagaatatagaaatacaggagaatgaagaaaattatgaagataat
ataggagacggttattatagtgaagagatattagaacagtattttcatgatatctcactg
tatactccgataccaaaagaaaaagaaaaagatatagtaaaaaaagctcaggatggtgat
gaagaggcacgtgagatgcttgtaacttctaacttgaaactagtcgctaagattgctatg
aaatattccaaatcaggtgttaattacattgaccttatacaagacggaacaataggactt
atagctgccattgataaatatgatctttctaagggtcatagtttcacatcttattctgta
tggtggataaaaagggagataataaactctatagcgaatagaataaatgcaataaaaata
cctagttatgtctatcttatgaataaaaaaataagaatatttgaagatgattttatggaa
agaaataacaagaaacccagctatcaagaaatatctgaggcattgaatttgtcattagag
gaagttgaaaaaatgaaagaagcatctgaaataggtgtaggcggatttgcagatggcaat
gaaccagatctaggtgactttaacacagttgatcagatagataaggaacttaatcttcta
gaagagagaagtaaaatatcaaatttaatgagaaaaatatctcctgaagagcaaaaggta
gtggaaatgtattatggtcttgatgacaataaaagattagggttcaaagagatatccaaa
ataatgggtgtttcagttgagaaagttaagtttttaaaggaaagggcaatactcaagcta
aaatgtgctaatgagaggatgtggggctag
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