KEGG   Ilyobacter polytropus: Ilyop_0672
Entry
Ilyop_0672        CDS       T01337                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
ipo  Ilyobacter polytropus
Pathway
ipo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ipo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Ilyop_0672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipo03400]
    Ilyop_0672
Enzymes [BR:ipo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Ilyop_0672
DNA repair and recombination proteins [BR:ipo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Ilyop_0672
SSDB
Motif
Pfam: PriA_C DEAD ResIII PriA_3primeBD Zn_ribbon_PriA Helicase_C AAA_30 SLFN-g3_helicase TrwB_AAD_bind AAA_11 AAA_19 Zn_ribbon_6 AAA_22 Zn_ribbon_IS1595 DUF1258
Other DBs
NCBI-ProteinID: ADO82459
UniProt: E3H6U0
LinkDB
Position
767086..769371
AA seq 761 aa
MRYYGVYVDGTNDFFTYCDMKDEFNIGERVAVPFRGRIKSGLIVYREMSENFEFKVLSIT
RKLDSHIHLSKAMVKLLLWMKNYYLCSFGQSFGAAVPGNLKVEYSYNYRFIEEIPIKTEE
EKKIGDYFREKSEVTKTTLYKNFSKDLIKSALENKILKGKNKLTIGDNLKEEYFELSEYF
SQRMCVTKATLEKKFSKELIDKMVRRGSLSLEKTLKDKRKTYDIDEADGIYSKESTVLNK
EQETAVSEIENSKKRYFLLKGVTGSGKTEVYLRLIRKALERNQGSIFLVPEISLTPQMVK
RFKGEFRENIAILHSKLTPVQRAKEWLSIYTGEKKVVLGVRSAVFAPVKNLKYVIIDEEH
EATYKQDSNPRYNAKYVGIKRGELEDAKVVLGSATPSIESYFFAKEGVFKLLELNERYNG
ANLPKLKLVDMKDEKSHYFSRELLKDMSETLRKDEQIMLLLNRKGYSTYIQCLECGHVEE
CPHCSITMNYYMSQGIYKCNYCGETKRYTGTCSKCKSKNLSHMGKGTERLEEEIRKHFDV
GIIRVDSESSRERDFYDNMYREFLEKKYHIMLGTQIISKGFHFPNVTLVGVINADSIMNF
PDFRSGEKTFQLVSQVAGRAGRESKKGEVLIQTFQPENHVMKRIIKGDYEGFYTDEIETR
KILSYPPFSRIINIIITSTIEEGLENYAKRFYDMIKDKGIEVYGPMKAPIYRIKGRYRYQ
IFLKGTRKKMNAVKPFLERCSCELRDEKYRVVIDVDPINLM
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgagatattacggagtttatgtagacgggacaaacgacttttttacctattgcgacatg
aaagatgaatttaatataggagagagagttgcagttccttttagaggaagaataaaaagt
ggtctgatagtttacagggaaatgtctgagaactttgagtttaaagttctttctataacc
agaaaattagatagtcatattcatctttctaaggctatggtaaagctattattatggatg
aaaaattattatctttgctcttttggacaaagttttggagccgctgttccaggcaacctg
aaggtagaatactcttataactacagatttatagaagaaattcctataaaaacagaggaa
gaaaaaaaaatcggagattatttcagagaaaaatcagaagtaacaaaaactactttgtat
aaaaatttttctaaggatcttattaaaagtgctttggaaaataaaattctaaaaggtaaa
aacaaactaacaattggagataatttaaaagaagagtattttgaattgtcagaatatttt
tctcagaggatgtgtgtaactaaagcaaccttagaaaagaagttttctaaggagttaata
gataaaatggtcagacgtgggtcactttcattggaaaagaccttaaaagacaagagaaaa
acttatgatatagatgaggctgacgggatatactctaaagaaagcacagttttgaataaa
gaacaggaaacagcagtatcagagatagaaaattcaaaaaaaaggtattttcttttaaaa
ggtgttaccggttctggaaagacagaagtatatctgaggcttataagaaaggccttagaa
agaaatcaaggttctatctttttagttcctgagatctccctaactccacagatggtaaag
aggttcaaaggtgaattcagggaaaatatagctattttacacagtaaactaactcctgta
caaagagcaaaggagtggctcagtatctataccggagaaaagaaagtggttcttggagta
aggtctgcggtatttgcacctgtgaaaaatcttaaatatgttataatagacgaggaacat
gaagcaacctataaacaggacagtaacccaagatacaatgcaaagtatgttgggataaaa
agaggggagttagaagatgcaaaggttgtattaggatcggcaaccccttcaatagaaagt
tatttttttgcaaaggagggagtttttaaactcctagaactgaatgaacgttacaatggt
gcaaatctaccaaaactaaagttagtggatatgaaggatgagaagagccattatttcagc
agggaacttctgaaagatatgtctgaaactttaagaaaagacgagcagataatgttactg
ctaaacagaaaaggttattctacatatattcaatgtctagaatgcggccatgtagaggaa
tgtcctcattgctctataaccatgaattattatatgagccaggggatctataaatgcaac
tactgcggggaaaccaaaagatatacaggaacctgcagcaaatgtaaaagtaagaatctg
agccacatgggaaaaggaacagaaagactcgaagaagagataagaaagcactttgatgtg
gggataataagagttgattctgaaagtagcagagaaagggacttttatgataatatgtat
agagagtttctggagaagaaataccatataatgcttggaactcagataatatctaagggt
tttcattttccaaatgtaactctggtaggggttataaatgccgattccataatgaatttt
ccggactttcgttctggtgaaaagacttttcagctggtgagtcaggtagctggaagggcc
ggtagggaaagtaaaaaaggagaggttctgatacagacttttcagccggaaaatcatgtg
atgaaaagaataataaaaggcgactatgaaggattttatactgatgagattgagactaga
aaaatactctcgtatccgcccttttcaagaattataaatataataataacctcaacaata
gaggagggcctagaaaactatgccaaaagattttatgatatgataaaagacaagggtata
gaggtctacgggcctatgaaagcccctatatataggattaagggaagatacagatatcag
atttttttaaagggaacaagaaagaagatgaatgcagtaaaacctttccttgagagatgc
agctgcgaacttcgagatgaaaaatacagagtggtcatagatgttgacccgataaattta
atgtaa

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