Ilyobacter polytropus: Ilyop_1116
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Entry
Ilyop_1116 CDS
T01337
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ipo
Ilyobacter polytropus
Pathway
ipo03420
Nucleotide excision repair
ipo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ipo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ilyop_1116
03430 Mismatch repair
Ilyop_1116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipo03400
]
Ilyop_1116
Enzymes [BR:
ipo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ilyop_1116
DNA repair and recombination proteins [BR:
ipo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ilyop_1116
MMR (mismatch excision repair)
Other MMR factors
Ilyop_1116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
PcrA_UvrD_tudor
CarD_TRCF_RID
ResIII
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
ADO82897
UniProt:
E3H7U5
LinkDB
All DBs
Position
complement(1203988..1206165)
Genome browser
AA seq
725 aa
AA seq
DB search
MSILDNLNSEQKKAASKVEGPVLILAGAGSGKTRTVTYRIAHMVKEKEISPYKILAVTFT
NKAAREMRERVETLIGEDSKRVMVSTFHAFGVRLLRMYGVELGYNSNFNIYDGDDQKRLI
KNIMKELVITDKSITPARIASIISRLKEDGITPEEYEKDSRGFLESYKTVSSVYKKYNSG
LKNNNAMDFADIIVNTNRLMDIQKIREKVQDRYQYVMVDEYQDTNNIQYQIINKIAEKYK
NICVVGDEDQSIYGFRGANIQNILDFEKDYPEAFVIKLEQNYRSTAHILEAANSIIKNNE
SSKGKNLWTEKNKGELIRIFESDDARHEAYLVLQEINRLKNSNRNYKDFTILYRTNAQSR
AFEELFIKFNIPYKVFGGMQFYQRMEIKDIMAYLNVINNSLDSLNLLRILNVPKRKIGVK
SVEKIAEFAENKGVSIFEALGRSEEIEGLSKNLKIVLSEFHSMLLNFIEESQYMPVSEIF
DGVVNSIGYFSYLESLGEEAESRIENIEELRNSISEMEKNQENLTLGEYLESTALISATD
KLEEEQDYVKLMTIHNSKGLEFPVVFVVGVEDEVFPGSKVEYDPTQLEEERRLCYVAITR
AEEKLYMYYAKQRFVYGQMQFRTQSRFLDEIPGHLVELMNVKKIEKTPEKKSSVKSSIEN
FNPIRDGKSKASSSNLPYSIGEKVTHKKFGLGIVRSINDKTIEVEFSIGKKKFLTMAADK
FINKV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagtatattagataatttgaatagcgaacagaaaaaagctgcctcaaaggtagagggg
cctgtacttatacttgctggagcagggagcggaaaaacaaggacagtcacctatagaata
gcccacatggtaaaagaaaaagagatctcaccttataaaattcttgctgtgacctttaca
aacaaggctgcgagagagatgagggaaagggttgaaactcttataggggaagattctaaa
agggttatggtttctacatttcacgcctttggagtaagacttctcagaatgtatggagtt
gaactaggctataattcaaactttaatatttatgacggagacgatcagaaaagactcata
aagaatataatgaaggaactggttataacagacaagagcataactcctgcaaggatagcc
tctataatatcaagactaaaagaagacggtattactcctgaagagtatgaaaaagattcc
agaggttttttagagagctataagacggtctcttctgtatacaagaaatataattctgga
cttaagaataacaatgccatggattttgctgatataatagtaaataccaacaggcttatg
gacattcagaaaataagagagaaagttcaggatagatatcagtatgtaatggtagatgaa
tatcaagacacaaataatattcagtatcagattataaataaaattgctgaaaaatataaa
aatatatgtgttgtaggagatgaggatcagagtatttacgggtttagaggggcgaatata
cagaatatcctggattttgaaaaggattatcctgaagcttttgtaataaaacttgaacaa
aattacagatccactgcccatatactagaagctgccaactctataataaaaaacaacgag
agttccaaaggaaaaaatctttggactgaaaaaaataaaggtgaattgataagaatattt
gaatcagatgatgcccgacacgaggcttatctggttcttcaggagataaacagactaaaa
aacagtaacagaaattataaagattttactatactttaccgaacaaatgcccagtctaga
gcatttgaagaacttttcataaaatttaatattccatacaaagttttcggaggtatgcag
ttttatcagaggatggagataaaggatataatggcttacttgaatgtcataaataattct
cttgattctctaaacttactgagaatattaaatgttcccaaaagaaaaataggtgtaaaa
agtgtagaaaagatagctgaatttgctgaaaataagggtgtaagtatttttgaggcacta
ggaagatcagaagagatagaaggcctgagtaaaaatctaaagatagtcttgtccgaattt
cattcgatgctcttaaatttcatagaagaaagccagtatatgccggtttctgagattttt
gacggagttgtaaattcaatagggtatttctcatatttggaaagtttgggtgaggaagca
gagtctcgaatagaaaatatagaggaattaagaaactctataagtgagatggaaaaaaat
caggaaaacttgactttgggtgaataccttgaaagcaccgcccttataagtgctacagat
aaactagaagaggaacaggattatgtcaaacttatgacgatacataactctaaaggtctt
gaattccctgtggtttttgttgtgggagttgaagatgaagttttcccaggatcaaaggtt
gaatatgatccgacacagctagaagaagagagaagactctgctatgtggcgataacaaga
gccgaagaaaaactttatatgtattatgcaaagcaaagatttgtatatggacagatgcag
tttaggacacagtctagatttttggatgagatacctggacaccttgtagagctaatgaac
gttaagaaaatagaaaaaactccagaaaagaaatcttctgtaaaatcttctattgagaat
tttaatcctattagagacgggaaatcaaaagcatccagcagtaacctgccttattctata
ggtgaaaaggttactcataaaaaatttggtttgggaatcgtgagaagtataaatgacaaa
acaatagaggtagaatttagtatagggaaaaagaaattcctgactatggctgcagataaa
ttcataaataaagtataa
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