Ilyobacter polytropus: Ilyop_1567
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Entry
Ilyop_1567 CDS
T01337
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ipo
Ilyobacter polytropus
Pathway
ipo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ipo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ilyop_1567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipo03019
]
Ilyop_1567
03400 DNA repair and recombination proteins [BR:
ipo03400
]
Ilyop_1567
Enzymes [BR:
ipo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ilyop_1567
Messenger RNA biogenesis [BR:
ipo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ilyop_1567
DNA repair and recombination proteins [BR:
ipo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ilyop_1567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ADO83346
UniProt:
E3H8T2
LinkDB
All DBs
Position
complement(1682321..1684111)
Genome browser
AA seq
596 aa
AA seq
DB search
MNNIREILKKYFGYVDFREGQEEIIKNILNKKDTLGIMPTGGGKSICYQIPALIFDGITL
VISPLISLMQDQVTALNSLGIESVYINSSLSQRESNEIFKNISLDQYKIVYVAPERLENE
YFLEQIKSKNISQIAVDEAHCISQWGHDFRKSYLGIPRFLKKLQSKPVISAFTATATPKV
RNDIVGNLNFDPDIYLNGFDRKNLKFTTVKGVNSLAYIKKYLKEHSGEGGIIYASTRKEV
DSIYNELLSRGYKVGKYHAGLKDSEREEYQNRFVEDELDIMVATNAFGMGIDKSNVRFVI
HNNLPKDIESYYQEAGRAGRDGLEANCILIFNPKDILTQRFFIENNQFDNSREIMDVKYE
KLNAMVNYCHTSKCIRSYILEYFGDEKIENCSNCSNCLDTGQTEDITIEAQKVISCIGRT
GERFGVNMIVGILAGSKNQNILKWNLNKISTYSLMKEYKQKEVRAIIDLLIGDGYIEVLK
GEFPTLKLTKKAYSFIKNRETFVRKVAQVDKKISYEGEQYFDALKKLRYEIAKEEGKPPY
TVFSDKTLHEMARYLPLNKEDMLDIHGVGEVKFERYGIQFIEAIEKIKSSLSPEQI
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattcgtgaaattttaaaaaaatattttggttacgttgatttcagagaaggt
caggaagaaataattaaaaatattttaaataaaaaagataccttagggataatgcctaca
ggaggtggaaaatctatatgctatcagatacctgcactgatatttgacggtattacgctg
gtgatttctccgcttatatcccttatgcaggatcaggttactgccttgaattccctaggg
atagagtcggtatatataaacagttccttatcccagagagaatcaaatgagatatttaaa
aatataagtctagatcaatataaaattgtgtatgtggcaccagaaaggctggaaaatgaa
tattttttggaacagataaaatctaagaacatatctcagattgcagtagatgaagctcac
tgtatatctcagtggggtcatgattttaggaaaagttatctggggatacccaggtttttg
aaaaaacttcagtctaaacctgttatatcggcatttacagccacagcaacccccaaggta
agaaatgatatagttgggaatttgaattttgatcccgatatatatttaaatggatttgac
agaaaaaaccttaaatttactactgtaaaaggcgtaaacagtctggcatatataaaaaaa
tatctgaaagagcacagtggtgagggaggaataatctatgcctccacccgtaaagaggtg
gattctatttataatgaacttttgagcaggggatataaggtaggtaaatatcatgcaggt
cttaaggactctgaaagagaagaatatcaaaacagatttgtagaagatgagctagacata
atggttgctactaatgcctttgggatgggtatagacaagtctaatgtaagatttgtgata
cataataaccttccaaaagatatagaaagctattatcaagaagcaggaagggcaggaaga
gacggacttgaagctaactgcattcttatatttaatcctaaagatatactgactcagaga
ttttttattgaaaataatcagtttgataactcccgtgagatcatggatgtaaaatatgag
aagctaaatgccatggtgaattactgtcatacttcgaaatgtatacgatcctatatacta
gaatattttggtgacgagaaaatagaaaactgtagcaactgcagcaactgtctagataca
ggtcagacagaggatataactatcgaagcacaaaaggtaatttcttgcataggaagaacc
ggggagagatttggggtcaatatgatagtagggatattggcaggatctaaaaatcaaaat
atattaaagtggaatttaaataaaataagtacctactcacttatgaaagagtataagcaa
aaggaggtaagagctattatagacttgcttattggtgacggatatatagaggttctgaaa
ggtgaatttccaactttaaagctgactaaaaaagcttattcatttataaagaatagggaa
acttttgtaaggaaggtagcacaggtagataaaaaaataagttatgagggagagcagtat
tttgatgctctcaagaaactgaggtacgaaatagcaaaagaggaggggaagcccccctat
actgttttttcagacaagactcttcacgaaatggccaggtatcttcctctgaacaaggag
gatatgcttgatatacacggagtcggagaggtgaaatttgaaaggtacggaatacagttt
atagaggcaatagaaaaaataaaatcctctttatctccggaacaaatctga
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