Candidatus Improbicoccus pseudotrichonymphae: CfP315_0005
Help
Entry
CfP315_0005 CDS
T09760
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ips
Candidatus Improbicoccus pseudotrichonymphae
Brite
KEGG Orthology (KO) [BR:
ips00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ips03016
]
CfP315_0005
Transfer RNA biogenesis [BR:
ips03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CfP315_0005
Prokaryotic type
Methyltransferases
CfP315_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
MMR_HSR1_Xtn
Ras
RsgA_GTPase
GTP_EFTU
ABC_tran
Dynamin_N
Roc
AAA_18
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BED91519
UniProt:
A0AA48HXG5
LinkDB
All DBs
Position
complement(4044..5414)
Genome browser
AA seq
456 aa
AA seq
DB search
MHDESDAIAAISTPVGIGSISAVRVSGCKSIEFADKIFKSFDGKKLQDIPGYRAKYGRIL
YEREVLDEVVALVFKAPKSYTGENSVDFFCHGGVVICKQILNALLSVGVRLAMPGEFSKR
AFLNGKISLDKAEAIADLISSEFEKSKKISLSAFNGETGNKIENIKKNLLEIFTNINAKI
DYPEDDFSEFSNKNIETQITKLNNEIKQLVESFKFGKIIKCGIKTAIVGSPNVGKSTLMN
LLSKKERSIVTDIPGTTRDIIEETILLGNIPLILTDTAGMRETDEVIEKLGAKKALELAH
TADLIFYVIDASKDLDKYNIDLMKKFKKNKIVAILNKIDLNHNIDVETLKKISFRVVKIS
AKKNIGINNLENSIYDFIGISSLKNENLIITNQRQFEILKKVKNLLEKMTNFLNMDRWDI
LAELIKESIEILGEFSGINVNETVIDEIFSKFCLGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatgaaagtgacgctatcgcagcaatatctactccggtaggcatcggttcgatt
tccgccgtaagagtttccggatgtaaatcgattgaatttgcggacaaaatttttaaatcc
tttgatggtaaaaaattgcaggacattccgggatatagagccaaatatggtagaatttta
tacgaaagagaggttttggacgaagttgtagcattggtttttaaggctccgaaaagttat
accggagaaaattcggtagattttttttgtcatggcggagttgttatttgcaaacaaata
ttaaatgctttgttgagtgtcggtgttaggcttgccatgccgggggaatttagcaaaaga
gcctttttaaatgggaaaattagtcttgataaggcagaggccatagctgatctgatctct
tcggaatttgaaaaatctaaaaagataagtttgtcggcttttaacggtgaaaccggtaac
aagatagaaaatattaagaaaaatcttttggaaatatttacaaatataaatgcaaaaata
gattatcccgaagatgatttcagcgaattttccaataaaaatatagaaacacaaataact
aaattaaataacgaaattaagcaattggtcgaaagttttaaatttggcaaaataataaaa
tgcggtataaaaacagcgatagtaggaagccctaacgtcggtaaatcaacacttatgaat
ttactttcaaagaaagagaggtcgattgttacagatattccggggactacaagagacatc
atagaagaaacgattttgcttggaaatataccattaattctgacagatactgccggaatg
agagaaaccgatgaagtaatagaaaaattaggggcaaaaaaggctttggaattagctcac
accgcagatttaatattttatgttatcgacgcttcgaaagatttagataaatacaacata
gatttaatgaaaaagttcaaaaaaaacaagatagtggcaatactaaacaaaattgatcta
aatcacaatatcgacgtcgaaactttgaaaaaaatatcttttagagttgtgaaaatttcg
gcaaaaaaaaatataggaataaataatttagagaattcaatttatgattttatcggtatt
tcttctctcaaaaacgaaaatttgataataaccaaccaacgtcaattcgagattttaaaa
aaagttaaaaatcttttggaaaaaatgacaaattttttaaatatggatcgttgggatatt
cttgcggaattaataaaagaatctattgagatcttgggagaatttagcggcataaatgtc
aacgaaacagttatagatgaaattttttctaaattttgcttgggaaaataa
DBGET
integrated database retrieval system
